LOCUS BC017256 2952 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens GLI-Kruppel family member HKR1, mRNA (cDNA clone
MGC:29642 IMAGE:3356680), complete cds.
ACCESSION BC017256
VERSION BC017256.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2952)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2952)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC017256.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: a Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34330189.
FEATURES Location/Qualifiers
source 1..2952
/db_xref="H-InvDB:HIT000050677"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29642 IMAGE:3356680"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2952
/gene="HKR1"
/db_xref="GeneID:284459"
/db_xref="HGNC:HGNC:4928"
/db_xref="MIM:165250"
CDS 270..2249
/gene="HKR1"
/codon_start=1
/product="GLI-Kruppel family member HKR1"
/protein_id="AAH17256.1"
/db_xref="GeneID:284459"
/db_xref="HGNC:HGNC:4928"
/db_xref="MIM:165250"
/translation="MRVNHTVSTMLPTCMVHRQTMSCSGAGGITAFVAFRDVAVYFTQ
EEWRLLSPAQRTLHREVMLETYNHLVSLEIPSSKPKLIAQLERGEAPWREERKCPLDL
CPESKPEIQLSPSCPLIFSSQQALSQHVWLSHLSQLFSSLWAGNPLHLGKHYPEDQKQ
QQDPFCFSGKAEWIQEGEDSRLLFGRVSKNGTSKALSSPPEEQQPAQSKEDNTVVDIG
SSPERRADLEETDKVLHGLEVSGFGEIKYEEFGPGFIKESNLLSLQKTQTGETPYMYT
EWGDSFGSMSVLIKNPRTHSGGKPYVCRECGRGFTWKSNLITHQRTHSGEKPYVCKDC
GRGFTWKSNLFTHQRTHSGLKPYVCKECGQSFSLKSNLITHQRAHTGEKPYVCRECGR
GFRQHSHLVRHKRTHSGEKPYICRECEQGFSQKSHLIRHLRTHTGEKPYVCTECGRHF
SWKSNLKTHQRTHSGVKPYVCLECGQCFSLKSNLNKHQRSHTGEKPFVCTECGRGFTR
KSTLSTHQRTHSGEKPFVCAECGRGFNDKSTLISHQRTHSGEKPFMCRECGRRFRQKP
NLFRHKRAHSGAFVCRECGQGFCAKLTLIKHQRAHAGGKPHVCRECGQGFSRQSHLIR
HQRTHSGEKPYICRKCGRGFSRKSNLIRHQRTHSG"
BASE COUNT 814 a 708 c 759 g 671 t
ORIGIN
1 gctggttggg acccgggaag gcctccctct taaggtcttt cccacacctc tgcaccttgt
61 tacctgactt tcggcttcag gatccgcagc gtgcacccgc gttccatctg tcttctgaga
121 ctttgccctt ctccaggaag agcactcagg agaccaggaa aatggccaca gggctcctga
181 gagccaaaaa agagctggca agcagatgaa ttaactcccc caagcttcta gctgtgtttc
241 tactcagtgg gagagatttg gagtgaatca tgagggtcaa ccacacagtg tctacaatgc
301 tccctacatg catggttcac agacaaacca tgagttgttc cggggctgga ggaataacgg
361 cgttcgtggc attcagggat gtggctgtgt acttcaccca ggaggagtgg aggttgttga
421 gccctgctca gaggaccctg cacagggagg tgatgctgga gacttataac catctggtct
481 cactggaaat tccatcttct aaaccaaaac tcattgctca gctggagcga ggggaagcgc
541 cctggagaga ggagagaaaa tgtccactgg acctctgtcc agaatcgaag ccagaaattc
601 aacttagtcc ctcctgccct ctgattttct ccagtcagca agctctcagc caacatgtgt
661 ggctgagtca tctctctcag ctgttttcaa gtttatgggc aggaaatcct ctccacctgg
721 gaaaacacta tccagaagat cagaaacaac agcaggatcc attctgcttt agtggcaaag
781 cagaatggat tcaagaggga gaagactcca gactcctgtt tgggagagta agcaaaaatg
841 gcacttcaaa ggcactttcc agcccacctg aagaacaaca gccagcacag tccaaggaag
901 acaacacagt ggtggatata gggtccagcc ctgaacggag ggcagatcta gaggaaacag
961 acaaagtatt gcatggttta gaagtctcag gatttggaga aatcaaatat gaagagtttg
1021 ggccaggctt tatcaaggag tcaaacctcc ttagcctcca gaagacacaa actggggaga
1081 caccttacat gtacactgag tggggagaca gctttggcag tatgtcagtc ctcatcaaaa
1141 acccaaggac acactctggg ggaaagcctt atgtgtgcag ggaatgtggg cgaggcttta
1201 cgtggaagtc aaacctgatc acacatcaga ggacacactc aggggagaaa ccttatgtgt
1261 gcaaggattg tggacgaggc tttacttgga agtcgaacct ctttacacat cagcggacac
1321 actcagggct caagccttat gtgtgcaagg aatgtgggca gagctttagc ctgaagtcaa
1381 acctcattac ccaccagagg gcgcacactg gggagaagcc ttatgtttgc agggaatgtg
1441 ggcgtggctt tcgccagcat tcacacctgg tcagacacaa gaggacacat tcaggagaga
1501 agccttacat ttgcagggag tgtgagcaag gctttagcca gaagtcacac ctcatcagac
1561 acttaaggac acacacagga gagaagcctt atgtatgcac agaatgtggg cgtcacttta
1621 gctggaaatc aaacctcaaa acacaccaga ggacacactc aggggttaaa ccttatgtct
1681 gcctggagtg cgggcagtgc tttagcctga agtcaaacct taacaaacac cagaggtcac
1741 acacggggga gaagccattt gtatgtacgg agtgtgggcg aggctttacc cggaaatcaa
1801 ccctgagcac gcaccagagg acacactcag gggagaagcc atttgtatgt gctgagtgtg
1861 gacgaggctt taatgataag tccaccctca tttcacacca gaggacacat tcaggggaaa
1921 agccttttat gtgcagggag tgtggcagaa ggtttcggca gaagcctaac ctgtttaggc
1981 acaagagggc acactcaggt gcctttgtgt gcagggagtg tgggcaaggc ttttgtgcta
2041 agttaactct cattaaacac cagagagcac acgcaggggg gaagcctcat gtgtgcaggg
2101 agtgtgggca aggctttagc cggcagtcac acctcattag acaccagagg acacattcag
2161 gagagaagcc ttatatttgc agaaagtgtg gacggggctt tagtcggaag tccaacctta
2221 tcagacatca gaggacacac tcaggataga aactttatgt gtatagggaa tgtggtacag
2281 cctttagcca ggagtcatac ttcatcagac accagaggac acacacagtg ctgtggcttt
2341 ttcagccatt gctagatacc aaagtggaga cattctgtgt gtgattatgc atgagactgt
2401 actggtaaga cttgtatctc catccacctg aaggagaatt gctggctcat tttcaggagc
2461 cctgcccttc ctcactgtgg atggtgggtt gtggaaaccc ggtcaggtaa tgatagtggc
2521 aggaggcagt caaatgccca ggcagatagg ggtgggtacc tggtgaaacc caaccttaaa
2581 gctgaagaca gtcccggcta aatcctcata ctgaattgag aacctgtctt cccatttggt
2641 gtgctttcct ccgattgatc ccaacccttc acctatttta cgtatacctg ccctttccta
2701 attggttttt acactgctgt gcccaccttt tgagtggtgc ctttgcatac ttacaaatca
2761 gtcaacgtgt attcccctat tctgagccca taaaagaccc agactcagct gcagtgagga
2821 gagaaatcac cctgctgtgg gggttgggga ccactccctg catcccctct ccactgagag
2881 ctgttctttt gctcaataaa attcttttct acccatcctc acccttcaaa aaaaaaaaaa
2941 aaaaaaaaaa aa
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