LOCUS BC016763 1146 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens homeobox D4, mRNA (cDNA clone MGC:22628 IMAGE:4068219), complete cds. ACCESSION BC016763 VERSION BC016763.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1146) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1146) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-NOV-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 32 Row: o Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23397671. FEATURES Location/Qualifiers source 1..1146 /db_xref="H-InvDB:HIT000037676" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:22628 IMAGE:4068219" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_58" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1146 /gene="HOXD4" /gene_synonym="HHO.C13" /gene_synonym="Hox-4.2" /gene_synonym="HOX-5.1" /db_xref="GeneID:3233" /db_xref="HGNC:HGNC:5138" /db_xref="MIM:142981" CDS 68..835 /gene="HOXD4" /gene_synonym="HHO.C13" /gene_synonym="Hox-4.2" /gene_synonym="HOX-5.1" /codon_start=1 /product="homeobox D4" /protein_id="AAH16763.1" /db_xref="GeneID:3233" /db_xref="HGNC:HGNC:5138" /db_xref="MIM:142981" /translation="MVMSSYMVNSKYVDPKFPPCEEYLQGGYLGEQGADYYGGGAQGA DFQPPGLYPRPDFGEQPFGGSGPGPGSALPARGHGQEPGGPGGHYAAPGEPCPAPPAP PPAPLPGARAYSQSDPKQPPSGTALKQPAVVYPWMKKVHVNSVNPNYTGGEPKRSRTA YTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDHKLPNT KGRSSSSSSSSSCSSSVAPSQHLQPMAKDHHTDLTTL" BASE COUNT 276 a 346 c 329 g 195 t ORIGIN 1 ggggccctat ggaaggagaa aaaaagacaa cacgagaaaa attagtattt tctaccttct 61 gaaattaatg gtcatgagtt cgtatatggt gaactccaag tatgtggacc ccaagttccc 121 tccgtgcgag gagtatttgc agggcggcta cctaggcgag cagggcgccg actactacgg 181 cggcggcgcg cagggcgcag acttccagcc cccggggctc tacccacggc ccgacttcgg 241 tgagcagcct ttcggaggca gcggccccgg gcctggctcg gcgctgcctg cgcggggtca 301 cggacaagag ccaggcggcc ccggcggtca ctacgccgct ccaggagagc cttgcccagc 361 tcccccggcg cctccgccgg cgcccctgcc tggcgcccgg gcctacagtc agtccgaccc 421 caagcagccg ccctccggga cggcactcaa gcagccggcc gtggtctacc cctggatgaa 481 gaaggtgcac gtgaattcgg tgaaccccaa ctacaccggt ggggaaccca agcggtcccg 541 aacggcctac acccggcagc aagtcctaga actggaaaaa gaatttcatt ttaacaggta 601 tctgacaagg cgccgtcgga ttgaaatcgc tcacaccctg tgtctgtcgg agcgccagat 661 caagatctgg ttccagaacc ggaggatgaa gtggaaaaaa gatcataagc tgcccaacac 721 taaaggcagg tcatcgtcct catcttcctc ctcatcttgc tcctcctcag tcgcccccag 781 ccagcattta cagccgatgg ccaaagacca ccacacggac ctgacgacct tatagaagtg 841 gggaccctgg gcccatctct ccctgcgcac caggctgagc cgaagctgcg ggggcaggcc 901 gggcctgctg tcacctcgct gggctctaag gtactgtggg gtggacctgg gacaagcagg 961 ccgccctcgg actaggttag catcctgccc gagggcagcc ccctccctag agcgggatgg 1021 ggatgggagg gggggcggga ttctctctct aagtatatta tatggcagga gctactgaga 1081 acataaaatc ttggcgagtc attaaactta tgaaaaacaa aaaaaaaaaa aaaaaaaaaa 1141 aaaaaa //