LOCUS       BC015916                2772 bp    mRNA    linear   HUM 04-OCT-2003
DEFINITION  Homo sapiens integrin, beta 7, mRNA (cDNA clone MGC:20174
            IMAGE:4644086), complete cds.
ACCESSION   BC015916
VERSION     BC015916.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2772)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2772)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
            Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
            Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
            Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
            Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
            Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
            Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
            George Yang, Scott Zuyderduyn, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 29 Row: l Column: 2
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 4504776.
FEATURES             Location/Qualifiers
     source          1..2772
                     /db_xref="H-InvDB:HIT000037393"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:20174 IMAGE:4644086"
                     /tissue_type="Colon, adenocarcinoma"
                     /clone_lib="NIH_MGC_15"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..2772
                     /gene="ITGB7"
                     /db_xref="GeneID:3695"
                     /db_xref="MIM:147559"
     CDS             72..2468
                     /gene="ITGB7"
                     /codon_start=1
                     /product="ITGB7 protein"
                     /protein_id="AAH15916.1"
                     /db_xref="GeneID:3695"
                     /db_xref="MIM:147559"
                     /translation="MVALPMVLVLLLVLSRGESELDAKIPSTGDATEWRNPHLSMLGS
                     CQPAPSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQ
                     QEVLQDQPLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDL
                     SYSMKDDLERVRQLGHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPT
                     RLERCQSPFSFHHVLSLTGDAQAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIG
                     WRNVSRLLVFTSDDTFHTAGDGKLGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVA
                     QALSAANIQPIFAVTSAALPVYQELSKLIPKSAVGELSEDSSNVVQLIMDAYNSLSST
                     VTLEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQATHCLP
                     EPHLLRLRALGFSEELIVELHTLCDCNCSDTQPQAPHCSDGQGHLQCGVCSCAPGRLG
                     RLCECSVAELSSPDLESGCRAPNGTGPLCSGKGHCQCGRCSCSGQSSGHLCECDDASC
                     ERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCISPEGGLCSGHGRCKCNRC
                     QCLDGYYGALCDQCPGCKTPCERHRDCAECGAFRTGPLATNCSTACAHTNVTLALAPI
                     LDDGWCKERTLDNQLFFFLVEDDARGTVVLRVRPQEKGADHTQAIVLGCVGGIVAVGL
                     GLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRFQEADSPTL
                     "
     misc_feature    219..1499
                     /gene="ITGB7"
                     /note="integrin_B; Region: Integrin, beta chain. Sequences
                     cut off at repeats due to overlap with EGF"
                     /db_xref="CDD:pfam00362"
BASE COUNT          621 a          787 c          822 g          542 t
ORIGIN      
        1 ctaaagccca gagagaaagt ctgacttgcc ccacagccag tgagtgactg cagcagcacc
       61 agaatctggg catggtggct ttgccaatgg tccttgtttt gctgctggtc ctgagcagag
      121 gtgagagtga attggacgcc aagatcccat ccacagggga tgccacagaa tggcggaatc
      181 ctcacctgtc catgctgggg tcctgccagc cagccccctc ctgccagaag tgcatcctct
      241 cacaccccag ctgtgcatgg tgcaagcaac tgaacttcac cgcgtcggga gaggcggagg
      301 cgcggcgctg cgcccgacga gaggagctgc tggctcgagg ctgcccgctg gaggagctgg
      361 aggagccccg cggccagcag gaggtgctgc aggaccagcc gctcagccag ggcgcccgcg
      421 gagagggtgc cacccagctg gcgccgcagc gggtccgggt cacgctgcgg cctggggagc
      481 cccagcagct ccaggtccgc ttccttcgtg ctgagggata cccggtggac ctgtactacc
      541 ttatggacct gagctactcc atgaaggacg acctggaacg cgtgcgccag ctcgggcacg
      601 ctctgctggt ccggctgcag gaagtcaccc attctgtgcg cattggtttt ggttcctttg
      661 tggacaaaac ggtgctgccc tttgtgagca cagtaccctc caaactgcgc cacccctgcc
      721 ccacccggct ggagcgctgc cagtcaccat tcagctttca ccatgtgctg tccctgacgg
      781 gggacgcaca agccttcgag cgggaggtgg ggcgccagag tgtgtccggc aatctggact
      841 cgcctgaagg tggcttcgat gccattctgc aggctgcact ctgccaggag cagattggct
      901 ggagaaatgt gtcccggctg ctggtgttca cttcagacga cacattccat acagctgggg
      961 acgggaagtt gggcggcatt ttcatgccca gtgatgggca ctgccacttg gacagcaatg
     1021 gcctctacag tcgcagcaca gagtttgact acccttctgt gggtcaggta gcccaggccc
     1081 tctctgcagc aaatatccag cccatctttg ctgtcaccag tgccgcactg cctgtctacc
     1141 aggagctgag taaactgatt cctaagtctg cagttgggga gctgagtgag gactccagca
     1201 acgtggtaca gctcatcatg gatgcttata atagcctgtc ttccaccgtg acccttgaac
     1261 actcttcact ccctcctggg gtccacattt cttacgaatc ccagtgtgag ggtcctgaga
     1321 agagggaggg taaggctgag gatcgaggac agtgcaacca cgtccgaatc aaccagacgg
     1381 tgactttctg ggtttctctc caagccaccc actgcctccc agagccccat ctcctgaggc
     1441 tccgggccct tggcttctca gaggagctga ttgtggagtt gcacacgctg tgtgactgta
     1501 attgcagtga cacccagccc caggctcccc actgcagtga tggccaggga cacctacaat
     1561 gtggtgtatg cagctgtgcc cctggccgcc taggtcggct ctgtgagtgc tctgtggcag
     1621 agctgtcctc cccagacctg gaatctgggt gccgggctcc caatggcaca gggcccctgt
     1681 gcagtggaaa gggtcactgt caatgtggac gctgcagctg cagtggacag agctctgggc
     1741 atctgtgcga gtgtgacgat gccagctgtg agcgacatga gggcatcctc tgcggaggct
     1801 ttggtcgctg ccaatgtgga gtatgtcact gtcatgccaa ccgcacgggc agagcatgcg
     1861 aatgcagtgg ggacatggac agttgcatca gtcccgaggg agggctctgc agtgggcatg
     1921 gacgctgcaa atgcaaccgc tgccagtgct tggacggcta ctatggtgct ctatgcgacc
     1981 aatgcccagg ctgcaagaca ccatgcgaga gacaccggga ctgtgcagag tgtggggcct
     2041 tcaggactgg cccactggcc accaactgca gtacagcttg tgcccatacc aatgtgaccc
     2101 tggccttggc ccctatcttg gatgatggct ggtgcaaaga gcggaccctg gacaaccagc
     2161 tgttcttctt cttggtggag gatgacgcca gaggcacggt cgtgctcaga gtgagacccc
     2221 aagaaaaggg agcagaccac acgcaggcca ttgtgctggg ctgcgtaggg ggcatcgtgg
     2281 cagtggggct ggggctggtc ctggcttacc ggctctcggt ggaaatctat gaccgccggg
     2341 aatacagtcg ctttgagaag gagcagcaac aactcaactg gaagcaggac agtaatcctc
     2401 tctacaaaag tgccatcacg accaccatca atcctcgctt tcaagaggca gacagtccca
     2461 ctctctgaag gagggaggga cacttaccca aggctcttct ccttggagga cagtgggaac
     2521 tggagggtga gaggaagggt gggtctgtaa gaccttggta ggggactaat tcactggcga
     2581 ggtgcggcca ccaccctact tcattttcag agtgacaccc aagagggctg cttcccatgc
     2641 ctgcaacctt gcatccatct gggctacccc acccaagtat acaataaagt cttacctcag
     2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2761 aaaaaaaaaa aa
//