LOCUS BC015893 3221 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens calcium binding and coiled-coil domain 2, mRNA (cDNA clone MGC:17318 IMAGE:3921397), complete cds. ACCESSION BC015893 VERSION BC015893.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3221) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3221) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC015893.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: n Column: 13. FEATURES Location/Qualifiers source 1..3221 /db_xref="H-InvDB:HIT000037382" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17318 IMAGE:3921397" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3221 /gene="CALCOCO2" /gene_synonym="MGC17318" /gene_synonym="NDP52" /db_xref="GeneID:10241" /db_xref="HGNC:HGNC:29912" /db_xref="MIM:604587" CDS 11..1351 /gene="CALCOCO2" /gene_synonym="MGC17318" /gene_synonym="NDP52" /codon_start=1 /product="calcium binding and coiled-coil domain 2" /protein_id="AAH15893.1" /db_xref="GeneID:10241" /db_xref="HGNC:HGNC:29912" /db_xref="MIM:604587" /translation="MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTF TQHFIPRRKDWIGIFRVGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDD EYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELK DSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQK MSSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQR KDQKKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGE NDLLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPL SIKKCPICKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL" BASE COUNT 1007 a 662 c 692 g 860 t ORIGIN 1 gacccctacc atggaggaga ccatcaaaga tccccccaca tcagctgtct tgctggatca 61 ctgtcatttc tctcaggtca tctttaacag tgtggagaag ttctacatcc ctggagggga 121 cgtcacatgt cattatacct tcacccagca tttcatccct cgtcgaaagg attggattgg 181 catctttaga gtggggtgga agacaacccg tgagtattac accttcatgt gggttacttt 241 gcccattgac ctaaacaaca aatcagctaa acagcaggaa gtccaattca aagcttacta 301 cctgcccaag gatgatgagt attaccagtt ctgctatgtg gatgaggatg gtgtggtccg 361 gggagcaagt attcctttcc aattccgtcc agaaaatgag gaagacatcc tggttgttac 421 cactcaggga gaggtggaag agattgagca gcacaacaag gagctttgca aagaaaacca 481 ggagctgaag gacagctgta tcagcctcca gaagcagaac tcagacatgc aggctgagct 541 ccaaaagaag caggaggagc tagaaaccct acagagcatc aataagaagt tggaactgaa 601 agtgaaagaa cagaaggact attgggagac agagctgctt caactgaaag aacaaaacca 661 gaagatgtcc tcagaaaatg agaagatggg aatcagagtg gatcagcttc aggcccagct 721 gtcaactcaa gagaaagaaa tggagaagct tgttcaggga gatcaagata agacagagca 781 gttagagcag ctgaaaaagg aaaatgacca cctctttctc agtttaactg aacagaggaa 841 ggaccagaag aagctcgagc agacagtgga gcaaatgaag cagaatgaaa ctactgcaat 901 gaagaaacaa caggaattaa tggatgaaaa ctttgacctg tcaaaaagac tgagtgagaa 961 cgaaattata tgtaatgctc tgcagagaca gaaagagaga ttggaaggag aaaatgatct 1021 tttgaagagg gagaacagca gattgctcag ttacatgggt ctggatttta attctttgcc 1081 gtatcaagta cctacttcag atgaaggagg cgcaagacaa aatccaggac ttgcctatgg 1141 aaacccatat tctggtatcc aagaaagttc ttcccccagc ccgctctcca tcaagaaatg 1201 ccctatctgc aaagcagatg atatttgtga tcacaccttg gagcaacagc agatgcagcc 1261 cctttgtttc aattgtccaa tttgtgacaa gatcttccca gctacagaga agcagatctt 1321 tgaagaccac gtgttctgcc actctctctg agtatcccaa cctcttggat gtatacagag 1381 attttataga atagaaccta tagcttctac catgagttat atgagtcaag atcctgccta 1441 acctgaaatt attagggatt tactcagccc tgctgccgct aacagtggag ttatgtcact 1501 gatctgaagg tcactgttaa gggcttctgc tgccatcctt gtgggttgct acctttaagt 1561 cgcataactc tagctgtatc atcctctcac ctgtcattct tctgagggtc tcagtacaag 1621 ggccctggga tggagccaac ctgggtattc acaacaggcc tgacttgata ctaagtgatt 1681 agttttccaa gttgtcccac tgccattcaa agtcagccct tgagtgtatt tgttctcagt 1741 cctaaccctg gggccagaga ttggtccgag gttgagaatt ccttcctcct catccttggt 1801 gttgctttct ccaaatgatt gttttagact agccaaaaat gccgtggcaa agagctcaga 1861 aatccaattt ggataccaaa ggtttctcat gttaatttct cagcccccaa agaagcatct 1921 tactcctgaa ccttagacag gaagtattgt ttcagtcaca gaaagctttt ctgggtacct 1981 ctggttagca ctttctactc tctgatattt cctatgtaca tagcttttat tgttgtaaat 2041 cctttcttaa tggttaaata ggattgttag caactatggg tttgcagttt tctgagtagg 2101 tgagttttga atatgggtaa atcagaataa tgagacaact tgttaatctc tttaatacta 2161 aaaataaatt actcttctat ttcagggact taggtaattt aaaataaacc ttcaatttat 2221 ggtcttctgt tttgaagctc atgggaaaat tgtgatcaaa agggctatgg gaagggcaga 2281 ccccgccaat gatttctctt cacctgtctt aagattaaat aaaaaagagt gtcctggcag 2341 ttatcttgag gtggggaagg aggtgatgaa acattagttt gtgaaatcca aggccctggc 2401 ttgctttctt tctttttttt tttttttttt ttgaaacagt ctctctctgt cacccaggct 2461 ggcgtgcaat ggcgcagttg actcactaca gcctctgcct cccaggttca agcgattctc 2521 atgccttagc ctcccaagta gctgggatta caggtgtgtg ccgcaatgcc cagctaattt 2581 ttgtgttttt agtagagaca gggtttcact atgttggcca ggctggtctc gaactcctgg 2641 cctcacgtga tctgtccact tcagccgtcc aaagtgctgg gattacaagc gtgagccact 2701 gtgctgggcc cgaggccctg acttcttgct gtaactttcc atgcattttt tttaaaagga 2761 gcagtgtgga ttttcgcacc ctttgtgaac taagttcaat gcgctctatc caaatttgcc 2821 taattgaact ataagaaagt aataattcca ttttctatcc cctcagggac tgaacaaatg 2881 gaaataactc ccaggcagta tcaggtggtc actacagaga cttccacaaa aacttttgaa 2941 tgatgtgaaa cacgatgtca tgaataaggg ttgagccaac tatagctctg tgttcctact 3001 gggctttccc taatgtggtt gggagttatg ccctagacta actgtattgt cctagtcaca 3061 gctccttgct ttgatttcat ccttgataaa atgaagatga aacttaaaaa aaaaaaaaaa 3121 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 3181 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //