LOCUS BC015766 3360 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens actinin, alpha 1, mRNA (cDNA clone MGC:23191 IMAGE:4856734), complete cds. ACCESSION BC015766 VERSION BC015766.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3360) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3360) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 34 Row: e Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12025669. FEATURES Location/Qualifiers source 1..3360 /db_xref="H-InvDB:HIT000037309" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23191 IMAGE:4856734" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_15" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3360 /gene="ACTN1" /db_xref="GeneID:87" /db_xref="HGNC:HGNC:163" /db_xref="MIM:102575" CDS 118..2796 /gene="ACTN1" /codon_start=1 /product="actinin, alpha 1" /protein_id="AAH15766.1" /db_xref="GeneID:87" /db_xref="HGNC:HGNC:163" /db_xref="MIM:102575" /translation="MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSH LRKAGTQIENIEEDFRDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIAS KGVKLVSIGAEEIVDGNVKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAP YKNVNIQNFHISWKDGLGFCALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDI PKMLDAEDIVGTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLM EDYEKLASDLLEWIRRTIPWLENRVPENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQL EINFNTLQTKLRLSNRPAFMPSEGRMVSDINNAWGCLEQVEKGYEEWLLNEIRRLERL DHLAEKFRQKASIHEAWTDGKEAMLRQKDYETATLSEIKALLKKHEAFESDLAAHQDR VEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETID QLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERL AILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWDHVRQLVPRRDQALTEEHAR QQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLSHLRQYEKSIVNYK PKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDA KGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGYDIGNDPQGEAEFARIMSI VDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYITMDELRRELPPDQ AEYCIARMAPYTGPDSVPGALDYMSFSTALYGESDL" BASE COUNT 878 a 945 c 909 g 628 t ORIGIN 1 cccggccccg ccagcccagc ccagcccagc cctactccct ccccacgcca gggcagcagc 61 cgttgctcag agagaaggtg gaggaagaaa tccagaccct agcacgcgcg caccatcatg 121 gaccattatg attctcagca aaccaacgat tacatgcagc cagaagagga ctgggaccgg 181 gacctgctcc tggacccggc ctgggagaag cagcagagaa agacattcac ggcatggtgt 241 aactcccacc tccggaaggc ggggacacag atcgagaaca tcgaagagga cttccgggat 301 ggcctgaagc tcatgctgct gctggaggtc atctcaggtg aacgcttggc caagccagag 361 cgaggcaaga tgagagtgca caagatctcc aacgtcaaca aggccctgga tttcatagcc 421 agcaaaggcg tcaaactggt gtccatcgga gccgaagaaa tcgtggatgg gaatgtgaag 481 atgaccctgg gcatgatctg gaccatcatc ctgcgctttg ccatccagga catctccgtg 541 gaagagactt cagccaagga agggctgctc ctgtggtgtc agagaaagac agccccttac 601 aaaaatgtca acatccagaa cttccacata agctggaagg atggcctcgg cttctgtgct 661 ttgatccacc gacaccggcc cgagctgatt gactacggga agctgcggaa ggatgatcca 721 ctcacaaatc tgaatacggc ttttgacgtg gcagagaagt acctggacat ccccaagatg 781 ctggatgccg aagacatcgt tggaactgcc cgaccggatg agaaagccat catgacttac 841 gtgtctagct tctaccacgc cttctctgga gcccagaagg cggagacagc agccaatcgc 901 atctgcaagg tgttggccgt caaccaggag aacgagcagc ttatggaaga ctacgagaag 961 ctggccagtg atctgttgga gtggatccgc cgcacaatcc cgtggctgga gaaccgggtg 1021 cccgagaaca ccatgcatgc catgcaacag aagctggagg acttccggga ctaccggcgc 1081 ctgcacaagc cgcccaaggt gcaggagaag tgccagctgg agatcaactt caacacgctg 1141 cagaccaagc tgcggctcag caaccggcct gccttcatgc cctctgaggg caggatggtc 1201 tcggacatca acaatgcctg gggctgcctg gagcaggtgg agaagggcta tgaggagtgg 1261 ttgctgaatg agatccggag gctggagcga ctggaccacc tggcagagaa gttccggcag 1321 aaggcctcca tccacgaggc ctggactgac ggcaaagagg ccatgctgcg acagaaggac 1381 tatgagaccg ccaccctctc ggagatcaag gccctgctca agaagcatga ggccttcgag 1441 agtgacctgg ctgcccacca ggaccgtgtg gagcagattg ccgccatcgc acaggagctc 1501 aatgagctgg actattatga ctcacccagt gtcaacgccc gttgccaaaa gatctgtgac 1561 cagtgggaca atctgggggc cctaactcag aagcgaaggg aagctctgga gcggaccgag 1621 aaactgctgg agaccattga ccagctgtac ttggagtatg ccaagcgggc tgcacccttc 1681 aacaactgga tggagggggc catggaggac ctgcaggaca ccttcattgt gcacaccatt 1741 gaggagatcc agggactgac cacagcccat gagcagttca aggccaccct ccctgatgcc 1801 gacaaggagc gcctggccat cctgggcatc cacaatgagg tgtccaagat tgtccagacc 1861 taccacgtca atatggcggg caccaacccc tacacaacca tcacgcctca ggagatcaat 1921 ggcaaatggg accacgtgcg gcagctggtg cctcggaggg accaagctct gacggaggag 1981 catgcccgac agcagcacaa tgagaggcta cgcaagcagt ttggagccca ggccaatgtc 2041 atcgggccct ggatccagac caagatggag gagatcggga ggatctccat tgagatgcat 2101 gggaccctgg aggaccagct cagccacctg cggcagtatg agaagagcat cgtcaactac 2161 aagccaaaga ttgatcagct ggagggcgac caccagctca tccaggaggc gctcatcttc 2221 gacaacaagc acaccaacta caccatggag cacatccgtg tgggctggga gcagctgctc 2281 accaccatcg ccaggaccat caatgaggta gagaaccaga tcctgacccg ggatgccaag 2341 ggcatcagcc aggagcagat gaatgagttc cgggcctcct tcaaccactt tgaccgggat 2401 cactccggca cactgggtcc cgaggagttc aaagcctgcc tcatcagctt gggttatgat 2461 attggcaacg acccccaggg agaagcagaa tttgcccgca tcatgagcat tgtggacccc 2521 aaccgcctgg gggtagtgac attccaggcc ttcattgact tcatgtcccg cgagacagcc 2581 gacacagata cagcagacca agtcatggct tccttcaaga tcctggctgg ggacaagaac 2641 tacattacca tggacgagct gcgccgcgag ctgccacccg accaggctga gtactgcatc 2701 gcgcggatgg ccccctacac cggccccgac tccgtgccag gtgctctgga ctacatgtcc 2761 ttctccacgg cgctgtacgg cgagagtgac ctctaatcca ccccgcccgg ccgccctcgt 2821 cttgtgcgcc gtgccctgcc ttgcacctcc gccgtcgccc atctcctgcc tgggttcggt 2881 ttcagctccc agcctccacc cgggtgagct ggggcccacg tggcatcgat cctccctgcc 2941 cgcgaagtga cagtttacaa aattattttc tgcaaaaaag aaaaaaaagt tacgttaaaa 3001 accaaaaaac tacatatttt attatagaaa aagtattttt tctccaccag acaaatggaa 3061 aaaaagagga aagattaact atttgcaccg aaatgtcttg ttttgttgcg acataggaaa 3121 ataaccaagc acaaagttat attccatcct ttttactgat ttttttttct tctatctgtt 3181 ccatctgctg tattcatttc tccaatctca tgtccatttt ggtgtgggag tcggggtagg 3241 gggtactctt gtcaaaaggc acattggtgc atgtgtgttt gctagctcac ttgtccatga 3301 aaatatttta tgatattaaa gaaaatcttt tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa //