LOCUS BC015660 3295 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 1, mRNA (cDNA clone MGC:23121 IMAGE:4844022), complete cds. ACCESSION BC015660 VERSION BC015660.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3295) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3295) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC015660.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 33 Row: o Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18104977. FEATURES Location/Qualifiers source 1..3295 /db_xref="H-InvDB:HIT000037246" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23121 IMAGE:4844022" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3295 /gene="PTPN1" /db_xref="GeneID:5770" /db_xref="HGNC:HGNC:9642" /db_xref="MIM:176885" CDS 137..1444 /gene="PTPN1" /codon_start=1 /product="protein tyrosine phosphatase, non-receptor type 1" /protein_id="AAH15660.1" /db_xref="GeneID:5770" /db_xref="HGNC:HGNC:9642" /db_xref="MIM:176885" /translation="MEMEKEFEQIDKSGSWAAIYQDIRHEASDFPCRVAKLPKNKNRN RYRDVSPFDHSRIKLHQEDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQ KSRGVVMLNRVMEKGSLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLEL ENLTTQETREILHFHYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAG IGRSGTFCLADTCLLLMDKRKDPSSVDIKKVLLEMRKFRMGLIQTADQLRFSYLAVIE GAKFIMGDSSVQDQWKELSHEDLEPPPEHIPPPPRPPKRILEPHNGKCREFFPNHQWV KEETQEDKDCPIKEEKGSPLNAAPYGIESMSQDTEVRSRVVGGSLRGAQAASPAKGEP SLPEKDEDHALSYWKPFLVNMCVATVLTAGAYLCYRFLFNSNT" BASE COUNT 845 a 844 c 830 g 776 t ORIGIN 1 cagcagcggc tagggcggcg gtagctgcag gggtcgggga ttgcagcggg cctcggggct 61 aagagcgcga cgcggcctag agcggcagac ggcgcagtgg gccgagaagg aggcgcagca 121 gccgccctgg cccgtcatgg agatggaaaa ggagttcgag cagatcgaca agtccgggag 181 ctgggcggcc atttaccagg atatccgaca tgaagccagt gacttcccat gtagagtggc 241 caagcttcct aagaacaaaa accgaaatag gtacagagac gtcagtccct ttgaccatag 301 tcggattaaa ctacatcaag aagataatga ctatatcaac gctagtttga taaaaatgga 361 agaagcccaa aggagttaca ttcttaccca gggccctttg cctaacacat gcggtcactt 421 ttgggagatg gtgtgggagc agaaaagcag gggtgtcgtc atgctcaaca gagtgatgga 481 gaaaggttcg ttaaaatgcg cacaatactg gccacaaaaa gaagaaaaag agatgatctt 541 tgaagacaca aatttgaaat taacattgat ctctgaagat atcaagtcat attatacagt 601 gcgacagcta gaattggaaa accttacaac ccaagaaact cgagagatct tacatttcca 661 ctataccaca tggcctgact ttggagtccc tgaatcacca gcctcattct tgaactttct 721 tttcaaagtc cgagagtcag ggtcactcag cccggagcac gggcccgttg tggtgcactg 781 cagtgcaggc atcggcaggt ctggaacctt ctgtctggct gatacctgcc tcttgctgat 841 ggacaagagg aaagaccctt cttccgttga tatcaagaaa gtgctgttag aaatgaggaa 901 gtttcggatg gggctgatcc agacagccga ccagctgcgc ttctcctacc tggctgtgat 961 cgaaggtgcc aaattcatca tgggggactc ttccgtgcag gatcagtgga aggagctttc 1021 ccacgaggac ctggagcccc cacccgagca tatcccccca cctccccggc cacccaaacg 1081 aatcctggag ccacacaatg ggaaatgcag ggagttcttc ccaaatcacc agtgggtgaa 1141 ggaagagacc caggaggata aagactgccc catcaaggaa gaaaaaggaa gccccttaaa 1201 tgccgcaccc tacggcatcg aaagcatgag tcaagacact gaagttagaa gtcgggtcgt 1261 ggggggaagt cttcgaggtg cccaggctgc ctccccagcc aaaggggagc cgtcactgcc 1321 cgagaaggac gaggaccatg cactgagtta ctggaagccc ttcctggtca acatgtgcgt 1381 ggctacggtc ctcacggccg gcgcttacct ctgctacagg ttcctgttca acagcaacac 1441 atagcctgac cctcctccac tccacctcca cccactgtcc gcctctgccc gcagagccca 1501 cgcccgacta gcaggcatgc cgcggtaggt aagggccgcc ggaccgcgta gagagccggg 1561 ccccggacgg acgttggttc tgcactaaaa cccatcttcc ccggatgtgt gtctcacccc 1621 tcatcctttt actttttgcc ccttccactt tgagtaccaa atccacaagc cattttttga 1681 ggagagtgaa agagagtacc atgctggcgg cgcagaggga aggggcctac acccgtcttg 1741 gggctcgccc cacccagggc tccctcctgg agcatcccag gcgggcggca cgccaacagc 1801 cccccccttg aatctgcagg gagcaactct ccactccata tttatttaaa caattttttc 1861 cccaaaggca tccatagtgc actagcattt tcttgaacca ataatgtatt aaaatttttt 1921 gatgtcagcc ttgcatcaag ggctttatca aaaagtacaa taataaatcc tcaggtagta 1981 ctgggaatgg aaggctttgc catgggcctg ctgcgtcaga ccagtactgg gaaggaggac 2041 ggttgtaagc agttgttatt tagtgatatt gtgggtaacg tgagaagata gaacaatgct 2101 ataatatata atgaacacgt gggtatttaa taagaaacat gatgtgagat tactttgtcc 2161 cgcttattct cctccctgtt atctgctaga tctagttctc aatcactgct cccccgtgtg 2221 tattagaatg catgtaaggt cttcttgtgt cctgatgaaa aatatgtgct tgaaatgaga 2281 aactttgatc tctgcttact aatgtgcccc atgtccaagt ccaacctgcc tgtgcatgac 2341 ctgatcatta catggctgtg gttcctaagc ctgttgctga agtcattgtc gctcagcaat 2401 agggtgcagt tttccaggaa taggcatttg cctaattcct ggcatgacac tctagtgact 2461 tcctggtgag gcccagcctg tcctggtaca gcagggtctt gctgtaactc agacattcca 2521 agggtatggg aagccatatt cacacctcac gctctggaca tgatttaggg aagcagggac 2581 accccccgcc ccccaccttt gggatcagcc tccgccattc caagtcaaca ctcttcttga 2641 gcagaccgtg atttggaaga gaggcacctg ctggaaacca cacttcttga aacagcctgg 2701 gtgacggtcc tttaggcagc ctgccgccgt ctctgtcccg gttcaccttg ccgagagagg 2761 cgcgtctgcc ccaccctcaa accctgtggg gcctgatggt gctcacgact cttcctgcaa 2821 agggaactga agacctccac attaagtggc tttttaacat gaaaaacacg gcagctgtag 2881 ctcccgagct actctcttgc cagcattttc acattttgcc tttctcgtgg tagaagccag 2941 tacagagaaa ttctgtggtg ggaacattcg aggtgtcacc ctgcagagct atggtgaggt 3001 gtggataagg cttaggtgcc aggctgtaag cattctgagc tgggcttgtt gtttttaagt 3061 cctgtatatg tatgtagtag tttgggtgtg tatatatagt agcatttcaa aatggacgta 3121 ctggtttaac ctcctatcct tggagagcag ctggctctcc accttgttac acattatgtt 3181 agagaggtag cgagctgctc tgctatatgc cttaagccaa tatttactca tcaggtcatt 3241 attttttaca atggccatgg aataaaccat ttttacaaaa aaaaaaaaaa aaaaa //