LOCUS BC015477 1446 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens helicase, lymphoid-specific, mRNA (cDNA clone IMAGE:3913594), partial cds. ACCESSION BC015477 VERSION BC015477.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1446) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1446) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 22 Row: l Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21914926. FEATURES Location/Qualifiers source 1..1446 /db_xref="H-InvDB:HIT000088707" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3913594" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1446 /gene="HELLS" /gene_synonym="FLJ10339" /gene_synonym="LSH" /gene_synonym="PASG" /gene_synonym="SMARCA6" /db_xref="GeneID:3070" /db_xref="MIM:603946" CDS <1..955 /gene="HELLS" /gene_synonym="FLJ10339" /gene_synonym="LSH" /gene_synonym="PASG" /gene_synonym="SMARCA6" /codon_start=2 /product="HELLS protein" /protein_id="AAH15477.1" /db_xref="GeneID:3070" /db_xref="MIM:603946" /translation="DDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMM LLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQ MTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTRAGGLGI NLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAK RKLEKLIIHKNHFKGGQSGLNLSKNFLDPKELMELLKSRDYEREIKGSREKVISDKDL ELLLDRSDLIDQMNASGPIKEKMGIFKILENSEDSSPECLF" misc_feature 110..679 /gene="HELLS" /gene_synonym="FLJ10339" /gene_synonym="LSH" /gene_synonym="PASG" /gene_synonym="SMARCA6" /note="HepA; Region: Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]" /db_xref="CDD:COG0553" BASE COUNT 471 a 216 c 300 g 459 t ORIGIN 1 agatgatttc cctaatgaat tggaaaaact gatcagtcaa atacagccag aggtggaccg 61 agaaagagct gttgtggaag tgaatatccc tgtagaatct gaagttaatc tgaagctgca 121 gaatataatg atgctacttc gtaaatgttg taatcatcca tatttgattg aatatcctat 181 agaccctgtt acacaagaat ttaagatcga tgaagaattg gtaacaaatt ctgggaagtt 241 cttgattttg gatcgaatgc tgccagaact aaaaaaaaga ggtcacaagg tgctgctttt 301 ttcacaaatg acaagcatgt tggacatttt gatggattac tgccatctca gagatttcaa 361 cttcagcagg cttgatgggt ccatgtctta ctcagagaga gaaaaaaaca tgcacagctt 421 caacacggat ccagaggtgt ttatcttctt agtgagtaca cgagctggtg gcctgggcat 481 taatctgact gcagcagata cagttatcat ttatgatagt gattggaacc cccagtcgga 541 tcttcaggcc caggatagat gtcatagaat tggtcagaca aagccagttg ttgtttatcg 601 ccttgttaca gcaaatacta tcgatcagaa aattgtggaa agagcagctg ctaaaaggaa 661 actggaaaag ttgatcatcc ataaaaatca tttcaaaggt ggtcagtctg gattaaatct 721 gtctaagaat ttcttagatc ctaaggaatt aatggaatta ttaaaatcta gagattatga 781 aagggaaata aaaggatcaa gagagaaggt cattagtgat aaagatctag agttgttgtt 841 agatcgaagt gatcttattg atcaaatgaa tgcttcagga ccaattaaag agaagatggg 901 gatattcaag atattagaaa attctgaaga ttccagtcct gaatgtttgt tttaaagtgg 961 agctcaagaa tagcttttaa aagttcttat ttacatctag tgatttccct gtattgggtt 1021 tgaaatactg attgtccact tcaccttttt tattatatca gttgacatgt aactagtacc 1081 atgcgtactt aaatagatgg taattttctg agccttacca agaacaaaga agtatccata 1141 ttaagtttag attttcagtt aatttttgag actgagtagt attcttggat acaggctgat 1201 gtgtacttaa ccacttccag atttatacag tcttcctgtg gaagtttagt aaatgtcttt 1261 ttccctcctt tcttctagta atgcagttca tgggctttag gtacttcagt tatgaagtag 1321 gcttttcatg gggagagatt gggattatgc tctctgttgt ttaagaaact gtttgatttt 1381 agagtctatt tctatgagat agtttaccaa ataaatgttc cttataagat gaaaaaaaaa 1441 aaaaaa //