LOCUS BC015325 1050 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens gypsy retrotransposon integrase 1, mRNA (cDNA clone IMAGE:4414731), complete cds. ACCESSION BC015325 VERSION BC015325.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1050) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1050) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 27 Row: i Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8923123 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1050 /db_xref="H-InvDB:HIT000037077" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4414731" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_89" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1050 /gene="GIN1" /gene_synonym="GIN-1" /gene_synonym="TGIN1" /db_xref="GeneID:54826" /db_xref="HGNC:HGNC:25959" CDS 42..710 /gene="GIN1" /gene_synonym="GIN-1" /gene_synonym="TGIN1" /codon_start=1 /product="GIN1 protein" /protein_id="AAH15325.1" /db_xref="GeneID:54826" /db_xref="HGNC:HGNC:25959" /translation="MVRSGKNGDLHLKQIAYYKRTCEYHSTTLPSERSGIRRAAKKFV FKEKKLFYVGKDRKQNRLVIVSEEEKKKVLRECHENDSGAHHGISRTLTLVESNYYWT SVTNDVKQWVYACQHCQVAKNTVIVAPKQHLLKVENPWSLVTVDLMGPFHTSNRSHVY AIIMTDLFTKWIVILPLCDVSASEVSKAIINIFFLYGPPQKIIMDQRDEFIQQKVFIS CKVQ" BASE COUNT 376 a 167 c 196 g 311 t ORIGIN 1 cttaaatctg tcgtttgaat ttaggaccac ctcggttcac aatggtccgt agtggaaaaa 61 atggtgacct tcatcttaaa cagattgcat attacaaacg aacttgtgaa tatcattcaa 121 ctacactgcc aagtgagaga agtggcataa gaagagcagc aaaaaaattt gtcttcaaag 181 aaaaaaagct gttttatgtt ggaaaagaca gaaaacaaaa tcgtttggta attgtttcag 241 aagaggaaaa aaagaaagtc ttaagagaat gccatgaaaa tgacagtgga gctcatcatg 301 gtatatccag gaccctcact ctggtagaat ccaattatta ttggacatct gtgaccaatg 361 atgtcaaaca gtgggtatat gcttgtcagc attgccaagt ggcaaaaaat acagttattg 421 tagcaccgaa acagcacctt ctcaaggtgg aaaatccatg gagtttagtt actgttgatc 481 tgatggggcc ttttcataca agcaacagaa gtcatgtata tgctataatc atgacagatt 541 tattcaccaa atggattgtg attttgcctc tatgtgatgt ttcagcatca gaagtttcta 601 aagctattat caatatattt ttcttatatg gacctcctca gaaaataata atggaccaaa 661 gagatgaatt cattcaacag aaagtcttta tctcttgcaa ggttcagtag tggcagatca 721 tgactacatt ggattgcctg aaattccgat tggagcatat caagcaaata ttctggtgga 781 agatgcaact attggtatag tcgataatga attactgaca tcaagcaagg atcgtgaact 841 attagaatat agaaatacga aaatctctcc attgatagac gatcatagtt ctcttgaaaa 901 gcagactttc agtctgttgg actcttcaaa ccaggttctt gaatacttaa gttagtaaat 961 accaaaattt atttaaagtg cttgtttaga atataaattc ttaatgatat cttattcatt 1021 aaaaacgttg tatagaaaaa aaaaaaaaaa //