LOCUS BC015024 1924 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens alkB, alkylation repair homolog 1 (E. coli), mRNA (cDNA clone IMAGE:3910971), partial cds. ACCESSION BC015024 VERSION BC015024.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1924) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1924) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: h Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 5174384. FEATURES Location/Qualifiers source 1..1924 /db_xref="H-InvDB:HIT000088540" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3910971" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1924 /gene="ALKBH1" /gene_synonym="ABH" /gene_synonym="alkB" /gene_synonym="hABH" /db_xref="GeneID:8846" /db_xref="HGNC:HGNC:17911" /db_xref="MIM:605345" CDS <1..1144 /gene="ALKBH1" /gene_synonym="ABH" /gene_synonym="alkB" /gene_synonym="hABH" /codon_start=2 /product="ALKBH1 protein" /protein_id="AAH15024.1" /db_xref="GeneID:8846" /db_xref="HGNC:HGNC:17911" /db_xref="MIM:605345" /translation="SVATLATEPGEDAFRKLFRFYRQSRPGTADLEGVIDFSAAHAAR GKGPGAQKVIKSQLNVSSVSEQNAYRAGLQPVSKWQAYGLKGYPGFIFIPNPFLPGYQ WHWVKQCLKLYSQKPNVCNLDKHMSKEETQDLWEQSKEFLRYKEATKRRPRSLLEKLR WVTVGYHYNWDSKKYSADHYTPFPSDLGFLSEQVAAACGFEDFRAEAGILNYYRLDST LGIHVDRSELDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRLL NHAVPRVLPNPEGEGLPHCLEAPLPAVLPRDSMVEPCSLEDWQVCASYLKTARVNMTV RQVLATDQNFPLEPIEDEKRDISTEGFCHLDDQNSEVKRARINPDS" BASE COUNT 521 a 468 c 427 g 508 t ORIGIN 1 ctctgtggcg actctggcga ctgagcccgg ggaggacgcc tttcggaaac ttttccgctt 61 ctaccgtcag agccggcccg ggaccgcaga cctggaaggg gtcatcgact tctcggcggc 121 ccacgcagcc cgtggcaagg gtcctggtgc ccaaaaggtg atcaaatctc agctaaatgt 181 gtcttctgtc agtgagcaga atgcatatag agcaggtctt cagcccgtca gcaagtggca 241 agcctatgga ctcaaaggct atcctgggtt tatttttatc ccaaacccct tcctcccagg 301 ttaccagtgg cactgggtga aacagtgcct taagttatat tcccagaaac ctaatgtatg 361 taacctggac aaacacatgt ctaaagaaga gacccaagat ctgtgggaac agagcaaaga 421 gttcctgagg tataaagaag cgactaaacg gagaccccga agtttactgg agaaactgcg 481 ttgggtgacc gtaggctacc attataactg ggacagtaag aaatactcag cagatcatta 541 cacacctttc ccttctgacc tgggtttcct ctcagagcaa gtagccgctg cctgtggatt 601 tgaggatttc cgagctgaag cagggatcct gaattactac cgcctggact ccacactggg 661 aatccacgta gacagatctg agctagatca ctccaaaccc ttgctgtcat tcagctttgg 721 acagtccgcc atctttctcc tgggtggtct tcaaagggat gaggccccca cggccatgtt 781 tatgcacagt ggtgacatca tgataatgtc gggtttcagc cgcctcttga accacgcagt 841 ccctcgtgtc cttccaaatc cagaagggga aggcctgcct cactgcctag aggcacctct 901 ccctgctgtc ctcccgagag attcaatggt agagccttgt tctttggagg actggcaggt 961 gtgtgccagt tacttgaaga ccgctcgtgt taacatgact gtccgacagg tcctggccac 1021 agaccagaat ttccctctag aacccatcga ggatgaaaaa agagacatca gtacagaagg 1081 tttctgccat ctggatgacc agaatagcga agtaaaacgg gccaggataa accctgacag 1141 ctgagacttg gagatcccat cctttttact caggcacctg cttaccgtaa atgatcatgt 1201 tattgtgtat tgccgtggac ttcagcaccc agacaagcca aaaacagaga cagggaagaa 1261 ctcattgttg atcacactgt tgccttggaa cccacgcaga agtaaactca gccactttgc 1321 tcagagaagt gtttgacatg gtctgttcct agttacatgt tggctgtaat gtatgttgag 1381 aagtcagtcc aaggaggtat gttcttccac aacagccttc tcagcctctg ctatttcctt 1441 tgaggaaggt agaagtgagt ttccatgttt gcagagtatt taaatacctc agattttatt 1501 aatgagaaat acagtacccc tccctccact ccatctggta atttatggta aaattgtggt 1561 tctgtgaacc agctattagt ctcatcttct taactccctc aggcatcatc aaattctttg 1621 atcttctctt ccacctctct ggctctcatg gaagaatcct ttacacatga aaacaatgga 1681 actggaaaat cttgtctttt agaaaagaaa ttaatcacaa ctatctctct tgcctaaaag 1741 ataaatatag gtaaacccaa ggaaagggga atttagtttc tctacatgtc atttcggtct 1801 ccaaactccc tgttggcttt ttaatgcaat tttaattgtt ggaataaaaa agtcccaagg 1861 gtgttttgtt actgttttct ccatgaataa actcacttga ttttaaatta aaaaaaaaaa 1921 aaaa //