LOCUS BC015021 2383 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens RAB23, member RAS oncogene family, mRNA (cDNA clone MGC:8900 IMAGE:3910708), complete cds. ACCESSION BC015021 VERSION BC015021.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2383) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2383) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: h Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34485713. FEATURES Location/Qualifiers source 1..2383 /db_xref="H-InvDB:HIT000050608" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8900 IMAGE:3910708" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2383 /gene="RAB23" /gene_synonym="HSPC137" /gene_synonym="MGC8900" /db_xref="GeneID:51715" /db_xref="HGNC:HGNC:14263" /db_xref="MIM:606144" CDS 621..1334 /gene="RAB23" /gene_synonym="HSPC137" /gene_synonym="MGC8900" /codon_start=1 /product="RAB23, member RAS oncogene family" /protein_id="AAH15021.1" /db_xref="GeneID:51715" /db_xref="HGNC:HGNC:14263" /db_xref="MIM:606144" /translation="MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV DFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSS WREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNE VFKYLAEKYLQKLKQQIAEDPELTHSSSNKIGVFNTSGGSHSGQNSGTLNGGDVINLR PNKQRTKKNRNPFSSCSIP" BASE COUNT 707 a 476 c 580 g 620 t ORIGIN 1 atgaggggag tcgagactcc cgcgccccac cacccccggc ggagctgctg ctgagccact 61 caatctgagc cctggctact aataaagttc gtttaaaaat cataatcatt cttaagagag 121 cgaaagaggg tgcgaactag ccgctcggcc ccgcagggag agctggcgcg tcgggaggag 181 acagcggcgg cagcggttgc gccgcgacca ggaggagccg gtggcgccgg gcggcgggtc 241 cgcggccggt gggggacggt gagtagcggc tcgcgctgcg gtgcagcggc gctgcactca 301 ctcgccctct ccaggggctg ggggttcgtc cggctccact ggggaagact cagcttctcc 361 ccggggtccc gggttgtgcc ttactctccg gagtgggcag gggtatcgag ggcaggggcc 421 tcccggcccg gctcccccat cccccggttc ggaccgccga gcgccggctc tcccctccct 481 gagcaccgat cccaagttcc agctagagaa ggtgggcggc agcgccagcc cggcgccccc 541 tcccagctcc cagcgatttg agagggaaga tctgatctcc tagaattaga gttggtacag 601 aaaccatttc agctccaaaa atgttggagg aagatatgga agtcgccata aagatggtgg 661 ttgtagggaa tggagcagtt ggaaaatcaa gtatgattca gcgatattgc aaaggcattt 721 ttacaaaaga ctacaagaaa accattggag ttgatttttt ggagcgacaa attcaagtta 781 atgatgaaga tgtcagacta atgttatggg acactgcagg tcaggaggaa tttgatgcaa 841 ttacaaaggc ctactatcga ggagcccagg cttgtgtgct cgtgttctct accacagata 901 gggaatcttt tgaagcagtt tccagttgga gagagaaagt agtagccgaa gtgggagata 961 taccaactgt acttgtgcaa aacaagattg atcttctgga tgattcttgt ataaagaatg 1021 aggaagctga ggcactggca aaaaggttaa agttaagatt ctacagaaca tcagtgaaag 1081 aagatctaaa tgtgaatgaa gtttttaagt atttggctga aaaatacctt cagaaactca 1141 aacaacaaat agctgaggat ccagaactaa cgcattcaag tagtaacaag attggtgtct 1201 ttaatacatc tggtggaagt cactccggtc agaattcagg taccctcaat ggtggagatg 1261 tcatcaatct tagacccaac aaacaaagga ccaagaaaaa cagaaatcct tttagcagct 1321 gtagcatacc ctaagatgtt ttgggaggaa aacaattgaa ttacattgtg caatgcatta 1381 agaaacccat ccagctgtca tggtatgtta caaggttttc agcagacttt gctcctaatg 1441 gctctctgaa agtgacagac ttaaatattg ctctgcagtg cttttcagaa tgtagagtga 1501 gacctctggt ggaaaaatta ttgccctgtg gactccttta atttttttta cattagacga 1561 agcttctcct gtttgtaaag gaatgctata agaaatttca aacacaggtt ttgcggaatt 1621 ttaaatgctg gaaaacataa atgaaatgcc taaatatatt gttacagatt ttaatactgt 1681 ggatcaagga aagatagcaa gcattctttt cctgaaattg gtcatgtagc ttttctgcga 1741 aatagtattg aatctgaata ctttcacaaa ataatactga aaggtaaacc ctaaatcttg 1801 ccagactgca ttagtatttt ggcattgaaa cttgtgcaat atctgtgtaa tgtagaatgt 1861 ggggtgtgca tgcagatgtc tggtactgga gtaagctgaa ggtatgtgca gtatttaaga 1921 aaatgtacat tctaattaat tcacttataa aaccatttac atattgtgta tatgttttta 1981 ttttcaaatg ataaactcta gacatatatt ttgcaaaatg agcttgggtt taaaaagtgc 2041 tttgtgccaa aaatatcata cctaattttt atagtgcttt actatcagaa tttatattgt 2101 ttattatatc ttttaaaagc agtaagcagt tttcatctga cagcgtagat aaaagaggag 2161 tataggaatt tgaatgctag agcatctccc aggtgagcct tattgcagat ctttttgata 2221 tagtcaccca taagcatggt gagctcctgc tctcataagg tcagccaaag ccccttaaga 2281 aggtacacag cacatctgca gtcattcagg aggtcctgtg aagtgtggtg atgcatctaa 2341 cacctggcta ctcttaaaaa aaaaaaaaaa aaaaaaaaaa aaa //