LOCUS BC015021 2383 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens RAB23, member RAS oncogene family, mRNA (cDNA clone
MGC:8900 IMAGE:3910708), complete cds.
ACCESSION BC015021
VERSION BC015021.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2383)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2383)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34485713.
FEATURES Location/Qualifiers
source 1..2383
/db_xref="H-InvDB:HIT000050608"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8900 IMAGE:3910708"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2383
/gene="RAB23"
/gene_synonym="HSPC137"
/gene_synonym="MGC8900"
/db_xref="GeneID:51715"
/db_xref="HGNC:HGNC:14263"
/db_xref="MIM:606144"
CDS 621..1334
/gene="RAB23"
/gene_synonym="HSPC137"
/gene_synonym="MGC8900"
/codon_start=1
/product="RAB23, member RAS oncogene family"
/protein_id="AAH15021.1"
/db_xref="GeneID:51715"
/db_xref="HGNC:HGNC:14263"
/db_xref="MIM:606144"
/translation="MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV
DFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSS
WREKVVAEVGDIPTVLVQNKIDLLDDSCIKNEEAEALAKRLKLRFYRTSVKEDLNVNE
VFKYLAEKYLQKLKQQIAEDPELTHSSSNKIGVFNTSGGSHSGQNSGTLNGGDVINLR
PNKQRTKKNRNPFSSCSIP"
BASE COUNT 707 a 476 c 580 g 620 t
ORIGIN
1 atgaggggag tcgagactcc cgcgccccac cacccccggc ggagctgctg ctgagccact
61 caatctgagc cctggctact aataaagttc gtttaaaaat cataatcatt cttaagagag
121 cgaaagaggg tgcgaactag ccgctcggcc ccgcagggag agctggcgcg tcgggaggag
181 acagcggcgg cagcggttgc gccgcgacca ggaggagccg gtggcgccgg gcggcgggtc
241 cgcggccggt gggggacggt gagtagcggc tcgcgctgcg gtgcagcggc gctgcactca
301 ctcgccctct ccaggggctg ggggttcgtc cggctccact ggggaagact cagcttctcc
361 ccggggtccc gggttgtgcc ttactctccg gagtgggcag gggtatcgag ggcaggggcc
421 tcccggcccg gctcccccat cccccggttc ggaccgccga gcgccggctc tcccctccct
481 gagcaccgat cccaagttcc agctagagaa ggtgggcggc agcgccagcc cggcgccccc
541 tcccagctcc cagcgatttg agagggaaga tctgatctcc tagaattaga gttggtacag
601 aaaccatttc agctccaaaa atgttggagg aagatatgga agtcgccata aagatggtgg
661 ttgtagggaa tggagcagtt ggaaaatcaa gtatgattca gcgatattgc aaaggcattt
721 ttacaaaaga ctacaagaaa accattggag ttgatttttt ggagcgacaa attcaagtta
781 atgatgaaga tgtcagacta atgttatggg acactgcagg tcaggaggaa tttgatgcaa
841 ttacaaaggc ctactatcga ggagcccagg cttgtgtgct cgtgttctct accacagata
901 gggaatcttt tgaagcagtt tccagttgga gagagaaagt agtagccgaa gtgggagata
961 taccaactgt acttgtgcaa aacaagattg atcttctgga tgattcttgt ataaagaatg
1021 aggaagctga ggcactggca aaaaggttaa agttaagatt ctacagaaca tcagtgaaag
1081 aagatctaaa tgtgaatgaa gtttttaagt atttggctga aaaatacctt cagaaactca
1141 aacaacaaat agctgaggat ccagaactaa cgcattcaag tagtaacaag attggtgtct
1201 ttaatacatc tggtggaagt cactccggtc agaattcagg taccctcaat ggtggagatg
1261 tcatcaatct tagacccaac aaacaaagga ccaagaaaaa cagaaatcct tttagcagct
1321 gtagcatacc ctaagatgtt ttgggaggaa aacaattgaa ttacattgtg caatgcatta
1381 agaaacccat ccagctgtca tggtatgtta caaggttttc agcagacttt gctcctaatg
1441 gctctctgaa agtgacagac ttaaatattg ctctgcagtg cttttcagaa tgtagagtga
1501 gacctctggt ggaaaaatta ttgccctgtg gactccttta atttttttta cattagacga
1561 agcttctcct gtttgtaaag gaatgctata agaaatttca aacacaggtt ttgcggaatt
1621 ttaaatgctg gaaaacataa atgaaatgcc taaatatatt gttacagatt ttaatactgt
1681 ggatcaagga aagatagcaa gcattctttt cctgaaattg gtcatgtagc ttttctgcga
1741 aatagtattg aatctgaata ctttcacaaa ataatactga aaggtaaacc ctaaatcttg
1801 ccagactgca ttagtatttt ggcattgaaa cttgtgcaat atctgtgtaa tgtagaatgt
1861 ggggtgtgca tgcagatgtc tggtactgga gtaagctgaa ggtatgtgca gtatttaaga
1921 aaatgtacat tctaattaat tcacttataa aaccatttac atattgtgta tatgttttta
1981 ttttcaaatg ataaactcta gacatatatt ttgcaaaatg agcttgggtt taaaaagtgc
2041 tttgtgccaa aaatatcata cctaattttt atagtgcttt actatcagaa tttatattgt
2101 ttattatatc ttttaaaagc agtaagcagt tttcatctga cagcgtagat aaaagaggag
2161 tataggaatt tgaatgctag agcatctccc aggtgagcct tattgcagat ctttttgata
2221 tagtcaccca taagcatggt gagctcctgc tctcataagg tcagccaaag ccccttaaga
2281 aggtacacag cacatctgca gtcattcagg aggtcctgtg aagtgtggtg atgcatctaa
2341 cacctggcta ctcttaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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