LOCUS BC014984 2594 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens small nuclear RNA activating complex, polypeptide 1, 43kDa, mRNA (cDNA clone MGC:23207 IMAGE:4872279), complete cds. ACCESSION BC014984 VERSION BC014984.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2594) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2594) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 34 Row: l Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923159. FEATURES Location/Qualifiers source 1..2594 /db_xref="H-InvDB:HIT000036944" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23207 IMAGE:4872279" /tissue_type="Skin, melanotic melanoma, high MDR." /clone_lib="NIH_MGC_49" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2594 /gene="SNAPC1" /gene_synonym="PTFgamma" /gene_synonym="SNAP43" /db_xref="GeneID:6617" /db_xref="HGNC:HGNC:11134" /db_xref="MIM:600591" CDS 13..1119 /gene="SNAPC1" /gene_synonym="PTFgamma" /gene_synonym="SNAP43" /codon_start=1 /product="small nuclear RNA activating complex, polypeptide 1, 43kDa" /protein_id="AAH14984.1" /db_xref="GeneID:6617" /db_xref="HGNC:HGNC:11134" /db_xref="MIM:600591" /translation="MGTPPGLQTDCEALLSRFQETDSVRFEDFTELWRNMKFGTIFCG RMRNLEKNMFTKEALALAWRYFLPPYTFQIRVGALYLLYGLYNTQLCQPKQKIRVALK DWDEVLKFQQDLVNAQHFDAAYIFRKLRLDRAFHFTAMPKLLSYRMKKKIHRAEVTEE FKDPSDRVMKLITSDVLEEMLNVHDHYQNMKHVISVDKSKPDKALSLIKDDFFDNIKN IVLEHQQWHKDRKNPSLKSKTNDGEEKMEGNSQETERCERAESLAKIKSKAFSVVIQA SKSRRHRQVKLDSSDSDSASGQGQVKATRKKEKKERLKPAGRKMSLRNKGNVQNIHKE DKPLSLSMPVITEEEENESLSGTEFTASKKRRKH" BASE COUNT 883 a 423 c 511 g 777 t ORIGIN 1 gcttcgggtg ccatggggac tcctcccggc ctgcagaccg actgcgaggc gctgctcagc 61 cgcttccagg agacggacag tgtacgcttc gaggacttca cggagctctg gagaaacatg 121 aagttcggga ctatcttctg tggcagaatg agaaatttag aaaagaacat gtttacaaaa 181 gaagctttag ctttggcttg gcgatatttt ttacctccat acaccttcca gatcagagtt 241 ggtgctttgt atctgctata tggattatat aatacccaac tgtgtcaacc aaaacaaaag 301 atcagagttg ccctgaagga ttgggatgaa gttttaaaat ttcagcaaga tttagtaaat 361 gcacagcatt ttgatgcagc ttatattttt aggaagctac gactagacag agcatttcac 421 tttacagcaa tgcccaaatt gctgtcatat aggatgaaga aaaaaattca ccgagctgaa 481 gttacagaag aatttaagga cccaagtgat cgtgtgatga aacttatcac ttctgatgta 541 ttagaggaaa tgctgaatgt tcatgatcat tatcagaaca tgaaacatgt aatttcagtt 601 gataagtcca agccagataa agccctcagc ttgataaagg atgatttttt tgacaatatt 661 aagaacatag ttttggagca tcagcagtgg cacaaagaca gaaagaatcc atccttaaag 721 tcaaaaacta atgatggaga agaaaaaatg gaaggaaatt cacaagaaac ggagagatgt 781 gaaagggcag aatcattagc gaaaataaaa tcaaaggcct tttcagttgt catacaggca 841 tccaaatcaa gaaggcatcg tcaagtcaaa ctcgactctt ctgactctga ttctgcatct 901 ggtcaagggc aagtcaaagc aactaggaaa aaagagaaga aagaaagatt gaaaccagca 961 ggaaggaaga tgtctctcag aaacaaaggc aatgtgcaga atatacacaa ggaagataaa 1021 cctttaagtc tgagtatgcc tgtaattaca gaagaagaag agaatgaaag tttgagtgga 1081 acagagttca ctgcatccaa gaagaggaga aaacactgaa caaagagcct ggtgtagttt 1141 ttaattttga gttttctgac agaagaaaag attgatattt tgtgtattga acaggaagac 1201 tgccagtatt aaaaaaatcc ttctgggaat ctgtaggtta tttcttggaa attgcaatac 1261 gtagttctag aataaaagta caaaaaatta gaataagaat tctttaacat tttctttaat 1321 gatttgcata aatggagata aaacttgtat ttagtatgta atagaaaaaa ttctgttatt 1381 cgcagattgt tactatttcc tataaggttt tgtgatacta tactgtccta atacagtctg 1441 gtaatactat tctattttat ttaaaatatt ttttattgaa atattaatgt ttattacatg 1501 caaataacta ttttgtatct acagtcggat aatggatttt ttattttgta tatttattct 1561 attttgtata ttgttaagtg caataaagtt tttgccttgc tttatttttt aatacataaa 1621 acttacattc tcataacgtg attgataact taggaagttc acaatgtatt ttctacttct 1681 gcaattaaat attctttagt gcttgtttat tattactaaa tactaattaa gtactaacaa 1741 gtacttaaat actaatgtat taagtattta agtactttct aataaaatct ttaacaataa 1801 taatgtaaat ttcagaatgt gtctctggta cagaatagtt gatattaaca gaaaaaaaaa 1861 aatctgtagc ttcatgaata tgccactctg ttaatttctt gttccagaca ttttaataga 1921 gattgcttga gccatgttgt ttgaattgct gccaatagca gaccatatcc ctatcatgtt 1981 gttggctcaa ctgttttttt tttttcccta atagagatgg agtatcgcta tgttgctcag 2041 gctggtcttg aactcctggg ctcaagctat cctcctgcct cagcctccca aagtactggg 2101 attataggtg tgagctactg tacccagcct taacctgttt cacagttgat tatacttcat 2161 gctgttttcc agcatggtat tattaaggga tttaaagttt gggttgcatg cctgtaatcc 2221 cagcattttg ggaggccgag gtgggcggat cacgaggtca ggagatcgag accatcgtga 2281 ctaacacagt gaaaccccgt ctctaataaa aatacgaaaa attagccagg cgtggtggcg 2341 ggcgcctgta atcccagcta ctcgggaagc tgaggcagga gaatggtgtg aacccagtga 2401 gccgagatcg tgccactgca ctccagcctg ggcaacagag tgagacttcg tctcaaaaaa 2461 aaaaaaaaaa gtttgggttg aagatcaaat tcgtgatatc tctatatcta atctttaaaa 2521 atcagaatgc taatgctgac gcaaataaaa ttttcattta ttagcaaaaa aaaaaaaaaa 2581 aaaaaaaaaa aaaa //