LOCUS BC014651 1681 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens homeobox B6, mRNA (cDNA clone MGC:20183 IMAGE:4548382), complete cds. ACCESSION BC014651 VERSION BC014651.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1681) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1681) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: a Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 24797133. FEATURES Location/Qualifiers source 1..1681 /db_xref="H-InvDB:HIT000036831" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20183 IMAGE:4548382" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_18" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1681 /gene="HOXB6" /gene_synonym="Hox-2.2" /gene_synonym="HU-2" /db_xref="GeneID:3216" /db_xref="HGNC:HGNC:5117" /db_xref="MIM:142961" CDS 326..1000 /gene="HOXB6" /gene_synonym="Hox-2.2" /gene_synonym="HU-2" /codon_start=1 /product="homeobox B6" /protein_id="AAH14651.1" /db_xref="GeneID:3216" /db_xref="HGNC:HGNC:5117" /db_xref="MIM:142961" /translation="MSSYFVNSTFPVTLASGQESFLGQLPLYSSGYADPLRHYPAPYG PGPGQDKGFATSSYYPPAGGGYGRAAPCDYGPAPAFYREKESACALSGADEQPPFHPE PRKSDCAQDKSVFGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRRGRQTYTRYQTLE LEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKLLSASQLSAEEE EEKQAE" BASE COUNT 409 a 490 c 477 g 305 t ORIGIN 1 caccacacct aggtcggagc actgtcgtcc ttcagggctc cagcctcttg atatttttgt 61 acttcagtat cagctcgata gagcaaaaga gagagaggac gagagagggg gtcagagaag 121 gggaagcaac ggctctcacg ttgggacaat attatctgga agctgaagaa gaaactgaat 181 actccttcct tcctccccac ccattccttt aaatccggag ggggaaaaaa tcccaaggtc 241 tgcaaaggcg cggcgctcgg actataaaac acaacaaatc ataaacccgg cggagcagca 301 gcggccgcgc gcgcctcccc tcccaatgag ttcctatttc gtgaactcca ccttccccgt 361 cactctggcc agcgggcagg agtccttcct gggccagcta ccgctctatt cgtcgggcta 421 tgcggacccg ctgagacatt accccgcgcc ctacgggcca gggccgggcc aggacaaggg 481 ctttgccact tcctcctatt acccgccggc gggcggtggc tacggccgag cggcgccctg 541 cgactacggg ccggcgccgg ccttctaccg cgagaaagag tcggcctgcg cactctccgg 601 cgccgacgag cagcccccgt tccaccccga gccgcggaag tcggactgcg cgcaggacaa 661 gagcgtgttc ggcgagacag aagagcagaa gtgctccact ccggtctacc cgtggatgca 721 gcggatgaat tcgtgcaaca gttcctcctt tgggcccagc ggccggcgag gccgccagac 781 atacacacgt taccagacgc tggagctgga gaaggagttt cactacaatc gctacctgac 841 gcggcggcgg cgcatcgaga tcgcgcacgc cctgtgcctg acggagaggc agatcaagat 901 atggttccag aaccgacgca tgaagtggaa aaaggagagc aaactgctca gcgcgtctca 961 gctcagtgcc gaggaggagg aagaaaaaca ggccgagtga aggtgctgga aagggaggga 1021 ggacgcgagg ggaaaggcct gtggggagcc acgggcgtca gagagacccg ggaaggaagg 1081 ctctcgggtg ggggagccag gagacctgct ctccggcgca gacaggcggg gcccagcgct 1141 ctcctggacg cccccgcccg cacagctccc ggcgggtgct ctgaggcctc actactcgag 1201 cccacccagc atcccgcgcg cccttccttc ccgaggaact cgcctcagcc tgatcaggct 1261 tcctggtgag aactgaggag cggactcact tgatgtttcc tggaagcaga gcaaaatgct 1321 cttgtccctg tcgcgtctca ttttgtccat gtcccccgtg cacggttcaa tggtagattc 1381 gctgtcccct cagcgggggc cttgaagact ccctgatccc agacctgtcg tctctcccac 1441 cccctcccca aagccactgg aaggagcaca tactacctag aagtaagaag aggagcctca 1501 gaagaaaaca aagttctatt ttattaattt tctatgtgtt gtgtttgtag tcttgtctta 1561 gctctggacg tgaaatactt cgatgatgat gatgatgatg atgatgatga taataataat 1621 aataataaca acaacaacaa caataataaa gatgtgaaaa ctcaaaaaaa aaaaaaaaaa 1681 a //