LOCUS BC014246 1907 bp mRNA linear HUM 30-SEP-2003 DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 9, mRNA (cDNA clone IMAGE:4642858), partial cds. ACCESSION BC014246 VERSION BC014246.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1907) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1907) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC014246.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 30 Row: n Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13514819. FEATURES Location/Qualifiers source 1..1907 /db_xref="H-InvDB:HIT000088337" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4642858" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>1907 /gene="DHX9" /gene_synonym="DDX9" /gene_synonym="LKP" /gene_synonym="NDH II" /gene_synonym="NDHII" /gene_synonym="RHA" /db_xref="GeneID:1660" /db_xref="MIM:603115" CDS 111..>1907 /gene="DHX9" /gene_synonym="DDX9" /gene_synonym="LKP" /gene_synonym="NDH II" /gene_synonym="NDHII" /gene_synonym="RHA" /codon_start=1 /product="DHX9 protein" /protein_id="AAH14246.1" /db_xref="GeneID:1660" /db_xref="MIM:603115" /translation="MGDVKNFLYAWCGKRKMTPSYEIRAVGNKNRQKFMCEVQVEGYN YTGMGNSTNKKDAQSNAARDFVNYLVRINEIKSEEVPAFGVASPPPLTDTPDTTANAE GDLPTTMGGPLPPHLALKAENNSEVGASGYGVPGPTWDRGANLKDYYSRKEEQEVQAT LESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIAEMTIY IKQLGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVVEAYSGLTKKKEGETVEPYKV NLSQDLEHQLQNIIQELNLEILPPPEDPSVPVALNIGKLAQFEPSQRQNQVGVVPWSP PQSNWNPWTSSNIDEGPLAFATPEQISMDLKNELMYQLEQDHDLQAILQERELLPVKK FESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISA VSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGIRGISHV IVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGR TYPVQEYFLEDCIQMTHFVPPPKAKKKKKKKKK" misc_feature 123..317 /gene="DHX9" /gene_synonym="DDX9" /gene_synonym="LKP" /gene_synonym="NDH II" /gene_synonym="NDHII" /gene_synonym="RHA" /note="DSRM; Region: Double-stranded RNA binding motif" /db_xref="CDD:smart00358" misc_feature 651..863 /gene="DHX9" /gene_synonym="DDX9" /gene_synonym="LKP" /gene_synonym="NDH II" /gene_synonym="NDHII" /gene_synonym="RHA" /note="DSRM; Region: Double-stranded RNA binding motif" /db_xref="CDD:smart00358" misc_feature 1251..1844 /gene="DHX9" /gene_synonym="DDX9" /gene_synonym="LKP" /gene_synonym="NDH II" /gene_synonym="NDHII" /gene_synonym="RHA" /note="HrpA; Region: HrpA-like helicases [DNA replication, recombination, and repair]" /db_xref="CDD:COG1643" BASE COUNT 599 a 382 c 448 g 478 t ORIGIN 1 gcgagttgct gtgcgtttct ctgttgtctc ggtagaaggc cagagtcaca cacggtccta 61 agagctgggc accaggaagc gaaggctgat ctgaagaaga cacttgaatc atgggtgacg 121 ttaaaaattt tctgtatgcc tggtgtggca aaaggaagat gaccccatcc tatgaaatta 181 gagcagtggg gaacaaaaac aggcagaaat tcatgtgtga ggttcaggtg gaaggttata 241 attacactgg catgggaaat tccaccaata aaaaagatgc acaaagcaat gctgccagag 301 actttgttaa ctatttggtt cgaataaatg aaataaagag tgaagaagtt ccagcttttg 361 gggtagcatc tccgccccca cttactgata ctcctgacac tacagcaaat gctgaaggag 421 atttaccaac aaccatggga ggacctcttc ctccacatct ggctctcaaa gcagaaaata 481 attctgaggt aggggcctct ggctatggtg ttcctgggcc cacctgggac cgaggagcca 541 acttgaagga ttactactca agaaaggaag aacaagaagt gcaagcgact ctagaatcag 601 aagaagtgga tttaaatgct gggcttcatg gaaactggac cttggaaaat gctaaagctc 661 gtctaaacca atattttcag aaagaaaaga tccaaggaga atataagtac acccaagtgg 721 gtcctgatca caacaggagc tttattgcag aaatgaccat ttatatcaag cagctgggca 781 gaaggatttt tgcacgagaa catggatcaa ataagaaatt ggcagcacag tcctgtgccc 841 tgtcacttgt cagacaactg taccatcttg gagtggttga agcttactcc ggacttacaa 901 agaagaagga aggagagaca gtggagcctt acaaagtaaa cctctctcaa gatttagagc 961 atcagctgca aaacatcatt caagagctaa atcttgagat tttgcccccg cctgaagatc 1021 cttctgtgcc agttgcactc aacattggca aattggctca gttcgaacca tctcagcgac 1081 aaaaccaagt gggtgtggtt ccttggtcac ctccacaatc caactggaat ccttggacta 1141 gtagcaacat tgatgagggg cctctggctt ttgctactcc agagcaaata agcatggacc 1201 tcaagaatga attgatgtac cagttggaac aggatcatga tttgcaagca atcttgcagg 1261 agagagagtt actgcctgtg aagaaatttg aaagtgagat tctggaagca atcagccaaa 1321 attcagttgt cattattaga ggggctactg gatgtgggaa aaccacacag gttccccagt 1381 tcattctaga tgactttatc cagaatgacc gagcagcaga gtgtaacatc gtagtaactc 1441 agcccagaag aatcagtgcg gtttctgtgg cagagcgagt tgcatttgaa agaggagaag 1501 agcctggaaa aagctgtggc tacagcgttc gatttgagtc tatacttcct cgtcctcatg 1561 ccagtataat gttttgtact gtaggtgtgc tcctgagaaa attagaagca ggcattcgag 1621 gaatcagtca tgtaattgta gatgaaatac atgaaagaga tattaatact gacttccttt 1681 tggtagtact gcgtgatgtt gttcaggctt atcctgaagt tcgcattgtt cttatgtctg 1741 ctactattga taccagcatg ttttgtgaat atttcttcaa ttgccccatc attgaagttt 1801 atgggaggac ttacccagtt caagaatatt ttctggaaga ctgcattcag atgacccact 1861 ttgttcctcc cccaaaagcc aaaaaaaaaa aaaaaaaaaa aaaaaaa //