LOCUS BC014225 1265 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens HOP homeobox, mRNA (cDNA clone MGC:20820 IMAGE:4335211), complete cds. ACCESSION BC014225 VERSION BC014225.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1265) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1265) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC014225.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 30 Row: d Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47717121. FEATURES Location/Qualifiers source 1..1265 /db_xref="H-InvDB:HIT000036588" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20820 IMAGE:4335211" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1265 /gene="HOPX" /gene_synonym="Cameo" /gene_synonym="HOP" /gene_synonym="LAGY" /gene_synonym="NECC1" /gene_synonym="OB1" /gene_synonym="SMAP31" /gene_synonym="Toto" /db_xref="GeneID:84525" /db_xref="HGNC:HGNC:24961" /db_xref="MIM:607275" CDS 305..526 /gene="HOPX" /gene_synonym="Cameo" /gene_synonym="HOP" /gene_synonym="LAGY" /gene_synonym="NECC1" /gene_synonym="OB1" /gene_synonym="SMAP31" /gene_synonym="Toto" /codon_start=1 /product="HOPX protein" /protein_id="AAH14225.1" /db_xref="GeneID:84525" /db_xref="HGNC:HGNC:24961" /db_xref="MIM:607275" /translation="MSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSE EETQKWFKQRLAKWRRSEGLPSECRSVID" BASE COUNT 330 a 312 c 321 g 302 t ORIGIN 1 cgcaggcagg gatacagttc ctgcaagggg tcccgggggg cgcgggaggc gcaggacgct 61 aggctctgcc gtcagcccgc aacagcgctc agtccaggga gggaggcccg ggtggggggc 121 agccgtaagc ccccgctcag cgtgcagcca ccggggactt gcgcggccgt ggcaccgctg 181 gagggggcgg cctggggctg gggctgcccg gcggcgccgc gaccgccttc cttcgctgcg 241 tcctgcccgc cccacgcctc gctcaccgcc gccgcttctc cctgccccgc agcgcgcagg 301 gaccatgtcg gcggagaccg cgagcggccc cacagaggac caggtggaaa tcctggagta 361 caacttcaac aaggtcgaca agcacccgga ttccaccacg ctgtgcctca tcgcggccga 421 ggcaggcctt tccgaggagg agacccagaa atggtttaag cagcgcctgg caaagtggcg 481 gcgctcagaa ggcctgccct cagagtgcag atccgtcata gactaaggag atggcaggca 541 ttgacagctt cactccatga aggccatctc tgtttctctc ctccgcttaa ccaagctgtt 601 gtggtttttc agcatagtgt tgtatgttcc attgctagct gtcctgctgt ttaacacagt 661 gttgtatttt ttttctaaat gtacataatt agaaaagaaa ataacaatag gaagctatgt 721 gtatcttctg tgtaaagcag tggcttcact ggaaaaatgg tgtggctagc atttcccttt 781 gagtcatgat gacagatggt gtgaaaacca tctaagtttg cttttgacca tcacctccca 841 gtagcaattt gctttcataa tccatttagc aatccaggcc tctgttgaaa agataatatg 901 agggagaagg gaacacattt ccttctgaac ttacttccct aagtcacttt ccttatgtat 961 catctaatac aatgatggtt gagtgaaaat acagaagggg tgtttgagta ttcagatttc 1021 ataaaacact tccttggaat atagctgcat taacttggaa agaagcctgt tgggccagaa 1081 gacagaaact ccaactggca aaaaagcaag catctaagaa aaaaaaccac caaagttctt 1141 gaatttacta tatttaaatg cattggttaa gtttattttg ctaaataaag tgaactgctt 1201 tttgtctcta aaatgatatt ctaaataaaa ccttaacttt ttgttgaaaa aaaaaaaaaa 1261 aaaaa //