LOCUS BC014035 1126 bp mRNA linear HUM 30-SEP-2003 DEFINITION Homo sapiens caldesmon 1, mRNA (cDNA clone IMAGE:4547970), partial cds. ACCESSION BC014035 VERSION BC014035.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1126) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1126) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC014035.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 28 Row: p Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 15149462. FEATURES Location/Qualifiers source 1..1126 /db_xref="H-InvDB:HIT000088259" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4547970" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_18" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>1126 /gene="CALD1" /gene_synonym="CDM" /gene_synonym="NAG22" /db_xref="GeneID:800" /db_xref="MIM:114213" CDS 185..>1126 /gene="CALD1" /gene_synonym="CDM" /gene_synonym="NAG22" /codon_start=1 /product="CALD1 protein" /protein_id="AAH14035.1" /db_xref="GeneID:800" /db_xref="MIM:114213" /translation="MLGGSGSHGRRSLAALSQIAYQRNDDDEEEAARERRRRARQERL RQKQEEESLGQVTDQVEVNAQNSVPDEEAKTTTTNTQVEGDDEAAFLERLARREERRQ KRLQEALERQKEFDPTITDASLSLPSRRMQNDTAENETTEKEEKSESRQERYEIEETE TVTKSYQKNDWRDAEENKKEDKEKEEEEEEKPKRGSIGENQIKDEKIKKDKEPKEEVK SFMDRKKGFTEVKSQNGEFMTHKLKHTENTFSRPGGRASVDTKEAEGAPQVEAGKRLE ELRSRRGETESEEFEKLKQKQQEAALELEELKKKKKKK" misc_feature 236..700 /gene="CALD1" /gene_synonym="CDM" /gene_synonym="NAG22" /note="Caldesmon; Region: Caldesmon" /db_xref="CDD:pfam02029" misc_feature 839..1045 /gene="CALD1" /gene_synonym="CDM" /gene_synonym="NAG22" /note="Caldesmon; Region: Caldesmon" /db_xref="CDD:pfam02029" BASE COUNT 378 a 269 c 339 g 140 t ORIGIN 1 ccagactttc gtcacaggga cagaccaacg tgttaacaca aagggagaac acgggagcat 61 cctgcaccgt gcatttcagc cacagatcac atggcccctc cgcgggccca gcccacgccc 121 tgaccgcccg gcctggccag gtctccgtat ctctctgccc cgccgcccct tcccaactgc 181 ggacatgctg ggtggatccg gatcgcatgg aagacgcagc ctggccgcgc tctcccaaat 241 cgcctaccag aggaatgacg atgatgaaga ggaggcagcc cgggaacggc gccgccgagc 301 ccgacaggaa cggctgcggc agaagcagga ggaagaatcc ttgggacagg tgaccgacca 361 ggtggaggtg aatgcccaga acagtgtgcc tgacgaggag gccaagacaa ccaccacaaa 421 cactcaagtg gaaggggatg atgaggccgc attcctggag cgcctggctc ggcgtgagga 481 aagacgccaa aaacgccttc aggaggctct ggagcggcag aaggagttcg acccaacaat 541 aacagatgca agtctgtcgc tcccaagcag aagaatgcaa aatgacacag cagaaaatga 601 aactaccgag aaggaagaaa aaagtgaaag tcgccaagaa agatacgaga tagaggaaac 661 agaaacagtc accaagtcct accagaagaa tgattggagg gatgctgaag aaaacaagaa 721 agaagacaag gaaaaggagg aggaggaaga ggagaagcca aagcgaggga gcattggaga 781 aaatcagatc aaagatgaaa agattaaaaa ggacaaagaa cccaaagaag aagttaagag 841 cttcatggat cgaaagaagg gatttacaga agttaagtcg cagaatggag aattcatgac 901 ccacaaactt aaacatactg agaatacttt cagccgccct ggagggaggg ccagcgtgga 961 caccaaggag gctgagggcg ccccccaggt ggaagccggc aaaaggctgg aggagcttcg 1021 tagtcgtcgc ggggagaccg agagcgaaga gttcgagaag ctcaaacaga agcagcagga 1081 ggcggctttg gagctggagg aactcaagaa aaaaaaaaaa aaaaaa //