LOCUS BC013693 2146 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens neurotrophic tyrosine kinase, receptor, type 3, mRNA (cDNA clone MGC:17113 IMAGE:4181574), complete cds. ACCESSION BC013693 VERSION BC013693.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2146) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2146) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: k Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 59889559. FEATURES Location/Qualifiers source 1..2146 /db_xref="H-InvDB:HIT000036328" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17113 IMAGE:4181574" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2146 /gene="NTRK3" /gene_synonym="gp145(trkC)" /gene_synonym="TRKC" /db_xref="GeneID:4916" /db_xref="HGNC:HGNC:8033" /db_xref="MIM:191316" CDS 6..1844 /gene="NTRK3" /gene_synonym="gp145(trkC)" /gene_synonym="TRKC" /codon_start=1 /product="neurotrophic tyrosine kinase, receptor, type 3" /protein_id="AAH13693.1" /db_xref="GeneID:4916" /db_xref="HGNC:HGNC:8033" /db_xref="MIM:191316" /translation="MDVSLCPAKCSFWRIFLLGSVWLDYVGSVLACPANCVCSKTEIN CRRPDDGNLFPLLEGQDSGNSNGNASINITDISRNITSIHIENWRSLHTLNAVDMELY TGLQKLTIKNSGLRSIQPRAFAKNPHLRYINLSSNRLTTLSWQLFQTLSLRELQLEQN FFNCSCDIRWMQLWQEQGEAKLNSQNLYCINADGSQLPLFRMNISQCDLPEISVSHVN LTVREGDNAVITCNGSGSPLPDVDWIVTGLQSINTHQTNLNWTNVHAINLTLVNVTSE DNGFTLTCIAENVVGMSNASVALTVYYPPRVVSLEEPELRLEHCIEFVVRGNPPPTLH WLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTIN GHFLKEPFPESTDNFILFDEVSPTPPITVTHKPEEDTFGVSIAVGLAAFACVLLVVLF VMINKYGRRSKFGMKGPVAVISGEEDSASPLHHINHGITTPSSLDAGPDTVVIGMTRI PVIENPQYFRQGHNCHKPDTWVFSNIDNHGILNLKDNRDHLVPSTHYIYEEPEVQSGE VSYPRSHGFREIMLNPISLPGHSKPLNHGIYVEDVNVYFSKGRHGF" BASE COUNT 534 a 599 c 514 g 499 t ORIGIN 1 cggagatgga tgtctctctt tgcccagcca agtgtagttt ctggcggatt ttcttgctgg 61 gaagcgtctg gctggactat gtgggctccg tgctggcttg ccctgcaaat tgtgtctgca 121 gcaagactga gatcaattgc cggcggccgg acgatgggaa cctcttcccc ctcctggaag 181 ggcaggattc agggaacagc aatgggaacg ccagtatcaa catcacggac atctcaagga 241 atatcacttc catacacata gagaactggc gcagtcttca cacgctcaac gccgtggaca 301 tggagctcta caccggactt caaaagctga ccatcaagaa ctcaggactt cggagcattc 361 agcccagagc ctttgccaag aacccccatt tgcgttatat aaacctgtca agtaaccggc 421 tcaccacact ctcgtggcag ctcttccaga cgctgagtct tcgggaattg cagttggagc 481 agaacttttt caactgcagc tgtgacatcc gctggatgca gctctggcag gagcaggggg 541 aggccaagct caacagccag aacctctact gcatcaacgc tgatggctcc cagcttcctc 601 tcttccgcat gaacatcagt cagtgtgacc ttcctgagat cagcgtgagc cacgtcaacc 661 tgaccgtacg agagggtgac aatgctgtta tcacttgcaa tggctctgga tcaccccttc 721 ctgatgtgga ctggatagtc actgggctgc agtccatcaa cactcaccag accaatctga 781 actggaccaa tgttcatgcc atcaacttga cgctggtgaa tgtgacgagt gaggacaatg 841 gcttcaccct gacgtgcatt gcagagaacg tggtgggcat gagcaatgcc agtgttgccc 901 tcactgtcta ctatccccca cgtgtggtga gcctggagga gcctgagctg cgcctggagc 961 actgcatcga gtttgtggtg cgtggcaacc ccccaccaac gctgcactgg ctgcacaatg 1021 ggcagcctct gcgggagtcc aagatcatcc atgtggaata ctaccaagag ggagagattt 1081 ccgagggctg cctgctcttc aacaagccca cccactacaa caatggcaac tataccctca 1141 ttgccaaaaa cccactgggc acagccaacc agaccatcaa tggccacttc ctcaaggagc 1201 cctttccaga gagcacggat aactttatct tgtttgacga agtgagtccc acacctccta 1261 tcactgtgac ccacaaacca gaagaagaca cttttggggt atccatagca gttggacttg 1321 ctgcttttgc ctgtgtcctg ttggtggttc tcttcgtcat gatcaacaaa tatggtcgac 1381 ggtccaaatt tggaatgaag ggtcccgtgg ctgtcatcag tggtgaggag gactcagcca 1441 gcccactgca ccacatcaac cacggcatca ccacgccctc gtcactggat gcggggcccg 1501 acactgtggt cattggcatg actcgcatcc ctgtcattga gaacccccag tacttccgtc 1561 agggacacaa ctgccacaag ccggacacgt gggtcttttc aaacatagac aatcatggga 1621 tattaaactt gaaggacaat agagatcatc tagtcccatc aactcactat atatatgagg 1681 aacctgaggt ccagagtggg gaagtgtctt acccaaggtc acatggtttc agagaaatta 1741 tgttgaatcc aataagcctt cccggacatt ccaagcctct taaccatggc atctatgttg 1801 aggatgtcaa tgtttatttc agcaaaggac gtcatggctt ttaaaaactc cttttaagcc 1861 tccttgtttt gatgtcacct tggtaggctg ggccctctga gaggttggaa gctctaggca 1921 ttgttctctt tggatccagg gatgctaagt agaaactgca tgagccacca gtgccccggc 1981 accctttaac accaccagat gggtgttttc ccccatccac cactggcagg gttgcccctt 2041 ccctccaatc atcactgtgc tccttttttc ccggcctacg aggcagctcc tgccactatc 2101 tttagagcca ataaagagaa ttaaaaacct gaaaaaaaaa aaaaaa //