LOCUS BC013642 1086 bp mRNA linear HUM 09-DEC-2005 DEFINITION Homo sapiens chitinase domain containing 1, mRNA (cDNA clone IMAGE:4151791), partial cds. ACCESSION BC013642 VERSION BC013642.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1086) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1086) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: c Column: 22. FEATURES Location/Qualifiers source 1..1086 /db_xref="H-InvDB:HIT000088142" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4151791" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1086 /gene="CHID1" /gene_synonym="FLJ42707" /gene_synonym="MGC3234" /db_xref="GeneID:66005" /db_xref="HGNC:HGNC:28474" /db_xref="IMGT/GENE-DB:28474" /db_xref="MIM:28474" CDS <1..961 /gene="CHID1" /gene_synonym="FLJ42707" /gene_synonym="MGC3234" /codon_start=2 /product="CHID1 protein" /protein_id="AAH13642.1" /db_xref="GeneID:66005" /db_xref="HGNC:HGNC:28474" /db_xref="IMGT/GENE-DB:28474" /db_xref="MIM:28474" /translation="RHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGR EMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKT VVQVAKNQHFDGFVVEVWNQLLSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITPG TDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQPGPNAPLSWVRACVQVLDPKSKWR SKILLGLNFYGMDYATSKDAREPVVGARYIQTLKDHRPQMVWDSQVSEHFFEYKKSRS GRHVVFYPTLKSLQVRLELARELGVGVSIWELGQGLDYFYDLL" BASE COUNT 240 a 302 c 326 g 218 t ORIGIN 1 cagacacttt gctggggatg tactgggcta tgtcactcca tggaacagcc atggctacga 61 tgtcaccaag gtctttggga gcaagttcac acagatctca cccgtctggc tgcagctgaa 121 gagacgtggc cgtgagatgt ttgaggtcac gggcctccac gacgtggacc aagggtggat 181 gcgagctgtc aggaagcatg ccaagggcct gcacatagtg cctcggctcc tgtttgagga 241 ctggacttac gatgatttcc ggaacgtctt agacagtgag gatgagatag aggagctgag 301 caagaccgtg gtccaggtgg caaagaacca gcatttcgat ggcttcgtgg tggaggtctg 361 gaaccagctg ctaagccaga agcgcgtggg cctcatccac atgctcaccc acttggccga 421 ggctctgcac caggcccggc tgctggccct cctggtcatc ccgcctgcca tcacccccgg 481 gaccgaccag ctgggcatgt tcacgcacaa ggagtttgag cagctggccc ccgtgctgga 541 tggtttcagc ctcatgacct acgactactc tacagcgcat cagcctggcc ctaatgcacc 601 cctgtcctgg gttcgagcct gcgtccaggt cctggacccg aagtccaagt ggcgaagcaa 661 aatcctcctg gggctcaact tctatggtat ggactacgcg acctccaagg atgcccgtga 721 gcctgttgtc ggggccaggt acatccagac actgaaggac cacaggcccc agatggtgtg 781 ggacagccag gtctcagagc acttcttcga gtacaagaag agccgcagtg ggaggcacgt 841 cgtcttctac ccaaccctga agtccctgca ggtgcggctg gagctggccc gggagctggg 901 cgttggggtc tctatctggg agctgggcca gggcctggac tacttctacg acctgctcta 961 ggtgggcatt gcggcctccg cggtggacgt gttcttttct aagccatgga gtgagtgagc 1021 aggtgtgaaa tacaggcctc cactccgttt gctgtgaaaa aaaaaaaaaa aaaaaaaaaa 1081 aaaaaa //