LOCUS BC013610 1444 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens claudin domain containing 1, mRNA (cDNA clone MGC:9861 IMAGE:3866668), complete cds. ACCESSION BC013610 VERSION BC013610.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1444) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1444) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: l Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 11096339. FEATURES Location/Qualifiers source 1..1444 /db_xref="H-InvDB:HIT000036304" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9861 IMAGE:3866668" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1444 /gene="CLDND1" /gene_synonym="GENX-3745" /gene_synonym="MGC111162" /gene_synonym="MGC3316" /gene_synonym="MGC9861" /db_xref="GeneID:56650" /db_xref="HGNC:HGNC:1322" CDS 82..843 /gene="CLDND1" /gene_synonym="GENX-3745" /gene_synonym="MGC111162" /gene_synonym="MGC3316" /gene_synonym="MGC9861" /codon_start=1 /product="claudin domain containing 1" /protein_id="AAH13610.1" /db_xref="GeneID:56650" /db_xref="HGNC:HGNC:1322" /translation="MDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYRSPVQENSS DLNKSIWDEFISDEADEKTYNDALFRYNGTVGLWRRCITIPKNMHWYSPPERTESFDV VTKCVSFTLTEQFMEKFVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLC ACICRSLYPTIATGILHLLAGLCTLGSVSCYVAGIELLHQKLELPDNVSGEFGWSFCL ACVSAPLQFMASALFIWAAHTNRKEYTLMKAYRVA" BASE COUNT 410 a 276 c 301 g 457 t ORIGIN 1 ggggagagta gggtgctgtg gtctgagcta gagggtgaag ctggcggagc aggaggatgg 61 gcgagcagtc tgaatgccag aatggataac cgttttgcta cagcatttgt aattgcttgt 121 gtgcttagcc tcatttccac catctacatg gcagcctcca ttggcacaga cttctggtat 181 gaatatcgaa gtccagttca agaaaattcc agtgatttga ataaaagcat ctgggatgaa 241 ttcattagtg atgaggcaga tgaaaagact tataatgatg cactttttcg atacaatggc 301 acagtgggat tgtggagacg gtgtatcacc atacccaaaa acatgcattg gtatagccca 361 ccagaaagga cagagtcatt tgatgtggtc acaaaatgtg tgagtttcac actaactgag 421 cagttcatgg agaaatttgt tgatcccgga aaccacaata gcgggattga tctccttagg 481 acctatcttt ggcgttgcca gttcctttta ccttttgtga gtttaggttt gatgtgcttt 541 ggggctttga tcggactttg tgcttgcatt tgccgaagct tatatcccac cattgccacg 601 ggcattctcc atctccttgc aggtctgtgt acactgggct cagtaagttg ttatgttgct 661 ggaattgaac tactccacca gaaactagag ctccctgaca atgtatccgg tgaatttgga 721 tggtccttct gcctggcttg tgtctctgct cccttacagt tcatggcttc tgctctcttc 781 atctgggctg ctcacaccaa ccggaaagag tacaccttaa tgaaggcata tcgtgtggca 841 tgagcaagaa actgcctgct ttacaattgc catttttatt tttttaaaat aatactgata 901 ttttccccac ctctcaattg tttttaattt ttatttgtgg atataccatt ttattatgaa 961 aatctatttt atttatacac attcaccact aaatacacac ttaataccac taaaatttat 1021 gtggtttact ttaagcgatg ccatctttca aataaactaa tctaggtcta gacagaaaga 1081 aatggataga gacttgacac aaatttatga aagaaaattg ggagtaggaa tgtgaccgaa 1141 aacaagttgt gctaatgtct gttagacttt tcagtaaaac taaagtaact gtatctgttc 1201 aactaaaaac tctatattag tttctttggg aaacctctca tcgtcaaaac tttatgttca 1261 ctttgctgtt gtagatagcc agtcaaccag cagtattagt gctgttttca aagatttaag 1321 ctctataaaa ttgggaaatt atctaagatc attttcccta agcattgaca catagcttca 1381 tctgaggtga gatatggcag ctgtttgtat ctgcactgtg tctgtctaca aaaaaaaaaa 1441 aaaa //