LOCUS BC013325 1507 bp mRNA linear HUM 04-OCT-2003 DEFINITION Homo sapiens hepatitis A virus cellular receptor 1, mRNA (cDNA clone MGC:13455 IMAGE:3826378), complete cds. ACCESSION BC013325 VERSION BC013325.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1507) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1507) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (31-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: a Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6912407. FEATURES Location/Qualifiers source 1..1507 /db_xref="H-InvDB:HIT000036214" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13455 IMAGE:3826378" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_58" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1507 /gene="HAVCR1" /gene_synonym="HAVCR" /gene_synonym="HAVCR-1" /gene_synonym="KIM-1" /gene_synonym="KIM1" /gene_synonym="TIM-1" /gene_synonym="TIM1" /gene_synonym="TIMD1" /db_xref="GeneID:26762" /db_xref="MIM:606518" CDS 169..1263 /gene="HAVCR1" /gene_synonym="HAVCR" /gene_synonym="HAVCR-1" /gene_synonym="KIM-1" /gene_synonym="KIM1" /gene_synonym="TIM-1" /gene_synonym="TIM1" /gene_synonym="TIMD1" /codon_start=1 /product="HAVCR1 protein" /protein_id="AAH13325.1" /db_xref="GeneID:26762" /db_xref="MIM:606518" /translation="MHPQVVILSLILHLADSVAGSVKVGGEAGPSVTLPCHYSGAVTS MCWNRGSCSLFTCQNGIVWTNGTHVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGV YCCRVEHRGWFNDMKITVSLEIVPPKVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTT VPTTTVPTTMSIPTTTTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLP RQNHEPVATSPSSPQPAETHPTTLQGAIRREPTSSPLYSYTTDGNDTVTESSDGLWNN NQTQLFLEHSLLTANTTKGIYAGVCISVLVLLALLGVIIAKKYFFKKEVQQLSVSFSS LQIKALQNAVEKEVQAEDNIYIENSLYATD" misc_feature 259..489 /gene="HAVCR1" /gene_synonym="HAVCR" /gene_synonym="HAVCR-1" /gene_synonym="KIM-1" /gene_synonym="KIM1" /gene_synonym="TIM-1" /gene_synonym="TIM1" /gene_synonym="TIMD1" /note="IGv; Region: Immunoglobulin V-Type" /db_xref="CDD:smart00406" BASE COUNT 452 a 369 c 300 g 386 t ORIGIN 1 gggcgttata tgtggtcttc tctcatttcc agcagagcag gctcatatga atcaaccaac 61 tgggtgaaaa gataagttgc aatctgagat ttaagacttg atcagatacc atctggtgga 121 gggtaccaac cagcctgtct gctcattttc cttcaggctg atcccataat gcatcctcaa 181 gtggtcatct taagcctcat cctacatctg gcagattctg tagctggttc tgtaaaggtt 241 ggtggagagg caggtccatc tgtcacacta ccctgccact acagtggagc tgtcacatcc 301 atgtgctgga atagaggctc atgttctcta ttcacatgcc aaaatggcat tgtctggacc 361 aatggaaccc acgtcaccta tcggaaggac acacgctata agctattggg ggacctttca 421 agaagggatg tctctttgac catagaaaat acagctgtgt ctgacagtgg cgtatattgt 481 tgccgtgttg agcaccgtgg gtggttcaat gacatgaaaa tcaccgtatc attggagatt 541 gtgccaccca aggtcacgac tactccaatt gtcacaactg ttccaaccgt cacgactgtt 601 cgaacgagca ccactgttcc aacgacaacg actgttccaa tgacgactgt tccaacgaca 661 actgttccaa caacaatgag cattccaacg acaacgactg ttctgacgac aatgactgtt 721 tcaacgacaa cgagcgttcc aacgacaacg agcattccaa caacaacaag tgttccagtg 781 acaacaactg tctctacctt tgttcctcca atgcctttgc ccaggcagaa ccatgaacca 841 gtagccactt caccatcttc acctcagcca gcagaaaccc accctacgac actgcaggga 901 gcaataagga gagaacccac cagctcacca ttgtactctt acacaacaga tgggaatgac 961 accgtgacag agtcttcaga tggcctttgg aataacaatc aaactcaact gttcctagaa 1021 catagtctac tgacggccaa taccactaaa ggaatctatg ctggagtctg tatttctgtc 1081 ttggtgcttc ttgctctttt gggtgtcatc attgccaaaa agtatttctt caaaaaggag 1141 gttcaacaac taagtgtttc atttagcagc cttcaaatta aagctttgca aaatgcagtt 1201 gaaaaggaag tccaagcaga agacaatatc tacattgaga atagtcttta tgccacggac 1261 taagacccag tggtgctctt tgagagttta cgcccatgag tgcagaagac tgaacagaca 1321 tcagcacatc agacgtcttt tagaccccaa gacaattttt ctgtttcagt ttcatctggc 1381 attccaacat gtcagtgata ctgggtagag taactctctc actccaaact gtgtatagtc 1441 aacctcatca ttaatgtagt cctaattttt tatgctgaaa aaaaaaaaaa aaaaaaaaaa 1501 aaaaaaa //