LOCUS BC013187 1542 bp mRNA linear HUM 03-OCT-2003 DEFINITION Homo sapiens major histocompatibility complex, class I, B, mRNA (cDNA clone MGC:17189 IMAGE:4344323), complete cds. ACCESSION BC013187 VERSION BC013187.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1542) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1542) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (27-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: l Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21327676. FEATURES Location/Qualifiers source 1..1542 /db_xref="H-InvDB:HIT000036172" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17189 IMAGE:4344323" /tissue_type="Adrenal cortex, carcinoma" /clone_lib="NIH_MGC_84" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1542 /gene="HLA-B" /db_xref="GeneID:3106" /db_xref="MIM:142830" CDS 10..1098 /gene="HLA-B" /codon_start=1 /product="HLA-B protein" /protein_id="AAH13187.1" /db_xref="GeneID:3106" /db_xref="MIM:142830" /translation="MRVTAPRTVLLLLSGALALTETWAGSHSMRYFYTAMSRPGRGEP RFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKTNTQTYRESL RNLRGYYNQSEAGSHTLQRMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLSSWTAA DTAAQITQRKWEAAREAEQLRAYLEGLCVEWLRRYLENGKETLQRADPPKTHVTHHPI SDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSG EEQRYTCHVQHEGLPKPLTLRWEPSSQSTIPIVGIVAGLAVLAVVVIGAVVATVMCRR KSSGGKGGSYSQAASSDSAQGSDVSLTA" misc_feature 82..618 /gene="HLA-B" /note="MHC_I; Region: Class I Histocompatibility antigen, domains alpha 1 and 2" /db_xref="CDD:pfam00129" misc_feature 673..888 /gene="HLA-B" /note="IGc1; Region: Immunoglobulin C-Type" /db_xref="CDD:smart00407" BASE COUNT 347 a 437 c 457 g 301 t ORIGIN 1 gacgccgaga tgcgggtcac ggcgccccga accgtcctcc tgctgctctc gggagccctg 61 gccctgaccg agacctgggc cggctcccac tccatgaggt atttctacac cgccatgtcc 121 cggcccggcc gcggggagcc ccgcttcatc tcagtgggct acgtggacga cacgcagttc 181 gtgaggttcg acagcgacgc cgcgagtccg agagaggagc cgcgggcgcc gtggatagag 241 caggaggggc cggagtattg ggaccggaac acacagatct gcaagaccaa cacacagact 301 taccgagaga gcctgcggaa cctgcgcggc tactacaacc agagcgaggc cgggtctcac 361 accctccaga ggatgtacgg ctgcgacgtg gggccggacg ggcgcctcct ccgcgggcat 421 gaccagtacg cctacgacgg caaggattac atcgccctga acgaggacct gagctcctgg 481 accgcggcgg acacggcggc tcagatcacc cagcgcaagt gggaggcggc ccgtgaggcg 541 gagcagctga gagcctacct ggagggcctg tgcgtggagt ggctccgcag atacctggag 601 aacgggaagg agacgctgca gcgcgcggac cccccaaaga cacatgtgac ccaccacccc 661 atctctgacc atgaggccac cctgaggtgc tgggccctgg gcttctaccc tgcggagatc 721 acactgacct ggcagcggga tggcgaggac caaactcagg acaccgagct tgtggagacc 781 agaccagcag gagatagaac cttccagaag tgggcagctg tggtggtgcc ttctggagaa 841 gagcagagat acacatgcca tgtacagcat gaggggctgc cgaagcccct caccctgaga 901 tgggagccat cttcccagtc caccatcccc atcgtgggca ttgttgctgg cctggctgtc 961 ctagcagttg tggtcatcgg agctgtggtc gctactgtga tgtgtaggag gaagagctca 1021 ggtggaaaag gagggagcta ctctcaggct gcgtccagcg acagtgccca gggctctgat 1081 gtgtctctca cagcttgaaa agcctgagac agctgtcttg tgagggactg agatgcagga 1141 tttcttcacg cctccccttt gtgacttcaa gagcctctgg catctctttc tgcaaaggca 1201 cctgaatgtg tctgcgtccc tgttagcata atgtgaggag gtggagagac agcccaccct 1261 tgtgtccact gtgacccctg ttcccatgct gatctgtgtt tcctccccag tcatctttct 1321 tgttccagag aggtggggct ggatgtctcc atctctgtct caactttatg tgcactgagc 1381 tgcaacttct tacttcccta ctgaaaataa gaatctgaat ataaatttgt tttctcaaat 1441 atttgctatg agaggttgat ggattaatta aataagtcaa ttcctggaat ttgaaagagc 1501 aaataaagac ctgagaacct tccagaaaaa aaaaaaaaaa aa //