LOCUS BC012932 2310 bp mRNA linear HUM 30-DEC-2006 DEFINITION Homo sapiens vacuolar protein sorting 45 homolog (S. cerevisiae), mRNA (cDNA clone MGC:9230 IMAGE:3853152), complete cds. ACCESSION BC012932 VERSION BC012932.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2310) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2310) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: a Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18105062. FEATURES Location/Qualifiers source 1..2310 /db_xref="H-InvDB:HIT000036043" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9230 IMAGE:3853152" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2310 /gene="VPS45" /gene_synonym="H1" /gene_synonym="H1VPS45" /gene_synonym="VPS54A" /gene_synonym="VSP45" /gene_synonym="VSP45A" /db_xref="GeneID:11311" /db_xref="HGNC:HGNC:14579" /db_xref="MIM:610035" CDS 52..1764 /gene="VPS45" /gene_synonym="H1" /gene_synonym="H1VPS45" /gene_synonym="VPS54A" /gene_synonym="VSP45" /gene_synonym="VSP45A" /codon_start=1 /product="vacuolar protein sorting 45 homolog (S. cerevisiae)" /protein_id="AAH12932.1" /db_xref="GeneID:11311" /db_xref="HGNC:HGNC:14579" /db_xref="MIM:610035" /translation="MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEI LQKEVYLFERIDSQNREIMKHLKAICFLRPTKENVDYIIQELRRPKYTIYFIYFSNVI SKSDVKSLAEADEQEVVAEVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQ GLTALLLSLKKCPMIRYQLSSEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDR CDDAITPLLNQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNM YLNFAEIGSNIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTV VGELSRLVSERNLLEVSEVEQELACQNDHSSALQNIKRLLQNPKVTEFDAARLVMLYA LHYERHSSNSLPGLMMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITK QFLKGLKGVENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFVIG GATYEEALTVYNLNRTTPGVRIVLGGTTVHNTKSFLEEVLASGLHSRSKESSQVTSRS ASRR" BASE COUNT 694 a 480 c 525 g 611 t ORIGIN 1 agccagaaaa gggggcggga agggctgtag ggtacttgtc aattcgccgc catgaacgtg 61 gtttttgctg tgaagcagta catttccaaa atgatagagg acagcgggcc tggtatgaaa 121 gtacttctca tggataaaga gacgactggc atagtgagta tggtatacac acaatcggag 181 attctacaga aggaagtgta cctctttgaa cgcattgatt ctcaaaatcg agagatcatg 241 aaacacctga aggcaatttg ttttcttcga cctacaaagg agaatgtgga ttatattatt 301 caggagctcc gaagacccaa atacactata tatttcattt atttcagtaa tgtgatcagc 361 aagagtgacg tgaagtcatt ggctgaagct gatgaacagg aagttgtggc tgaggttcag 421 gaattttatg gtgattacat tgctgtgaac ccacatttgt tttccctcaa tattttgggt 481 tgctgccagg gtcgaaattg ggatccagcc cagctatcta gaacaactca agggcttaca 541 gctctccttt tatctctgaa gaagtgtccc atgattcgtt atcagctctc atcagaggca 601 gcaaagagac ttgcagagtg cgttaagcaa gtgataacta aagaatatga actgtttgaa 661 ttccgtcgga cagaggttcc tccattgctc cttattttag atcgctgtga tgatgccatc 721 accccattgc taaaccagtg gacatatcag gccatggtcc acgaactact aggcataaac 781 aacaatcgga ttgatctttc cagagtgccg ggaatcagta aagacttaag agaagtggtc 841 ctatctgctg aaaatgatga attctatgct aataatatgt acctgaactt tgctgagatt 901 ggtagcaata taaagaatct catggaagat tttcagaaga agaaaccaaa agaacagcaa 961 aaactagaat caatagcaga catgaaggcg tttgttgaga attatccaca gttcaagaaa 1021 atgtctggga ctgtttcaaa gcatgtgaca gtggttggag aactgtctcg attggtcagt 1081 gaacggaatc tgctggaggt ttcagaggtt gagcaagaac tggcctgtca aaatgaccat 1141 tctagtgctc tccagaatat aaaaaggctt ctgcagaacc ccaaagtgac agagtttgat 1201 gctgcccgcc tggtgatgct ttatgcttta cattatgagc gacacagcag caatagcctg 1261 ccaggactaa tgatggacct caggaataaa ggtgtttctg agaagtatcg aaagctcgtg 1321 tctgcagttg ttgaatatgg tggtaaacga gtcagaggaa gtgacctctt cagccccaaa 1381 gatgctgtgg ctatcaccaa acaattcctc aaaggactga agggagtaga aaatgtatat 1441 acacagcatc aacctttcct acatgaaacc ctggatcatc tcatcaaagg aaggcttaag 1501 gaaaacctat atccttattt aggccccagc acactcagag acagacctca ggatatcatt 1561 gtgtttgtaa ttggaggagc cacctatgaa gaggctctaa cagtttataa cctgaaccgc 1621 accactcctg gagtgaggat tgtcctggga ggcaccacag tgcacaacac gaaaagtttc 1681 ctagaggaag ttctggcttc tggactgcac agccgaagca aggagagctc tcaagtcaca 1741 tcaaggtcag cgagcagaag atgaaacggt ggttggggga agggcacagc ttcctctctt 1801 gtccccacta caggttttcc ctactaaaca aaggtgttgg agagcagctt tgggttctgt 1861 gctggttgtt agaactcatc tccaggtagc ccacggatac gtggttggca cagacacaag 1921 actcccagag ttgtcctaac aataagtctg agcccatctc aacccacttt tctccggtag 1981 tctttatgta tctgttagca caatcacttc agttactgat gaattttgtt gggatctgac 2041 ttggggaaag ggttatcaga gcctagaggg gcttaaaaag taatcgtttg atgtacatac 2101 ctacctcctt ggcttccttt ctcttccctt aaccctttct gcttttcatt aaccacattc 2161 ctgcacaact catttctgaa aacctaccat gtttctttac agagccatcc aaaaattttt 2221 tgtccctaca tagcaatttt ctgtggcact gagaaaccat gtatgaccac aataaaaatc 2281 cattttgtga aaggaaaaaa aaaaaaaaaa //