LOCUS BC012884 1273 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens CD47 molecule, mRNA (cDNA clone MGC:9240 IMAGE:3857911), complete cds. ACCESSION BC012884 VERSION BC012884.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1273) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1273) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: c Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68223312. FEATURES Location/Qualifiers source 1..1273 /db_xref="H-InvDB:HIT000036012" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9240 IMAGE:3857911" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_66" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1273 /gene="CD47" /gene_synonym="IAP" /gene_synonym="OA3" /db_xref="GeneID:961" /db_xref="HGNC:HGNC:1682" /db_xref="MIM:601028" CDS 104..1021 /gene="CD47" /gene_synonym="IAP" /gene_synonym="OA3" /codon_start=1 /product="CD47 molecule" /protein_id="AAH12884.1" /db_xref="GeneID:961" /db_xref="HGNC:HGNC:1682" /db_xref="MIM:601028" /translation="MWPLVAALLLGSACCGSAQLLFNKTKSVEFTFCNDTVVIPCFVT NMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDK SDAVSHTGNYTCEVTELTREGETIIELKYRVVSWFSPNENILIVIFPIFAILLFWGQF GIKTLKYRSGGMDEKTIALLVAGLVITVIVIVGAILFVPGEYSLKNATGLGLIVTSTG ILILLHYYVFSTAIGLTSFVIAILVIQVIAYILAVVGLSLCIAACIPMHGPLLISGLS ILALAQLLGLVYMKFVASNQKTIQPPRNN" BASE COUNT 369 a 237 c 286 g 381 t ORIGIN 1 tgcctgtgac gcgcggcggc ggtcggtcct gcctgtaacg gcggcggcgg ctgctgctcc 61 agacacctgc ggcggcggcg gcgaccccgc ggcgggcgcg gagatgtggc ccctggtagc 121 ggcgctgttg ctgggctcgg cgtgctgcgg atcagctcag ctactattta ataaaacaaa 181 atctgtagaa ttcacgtttt gtaatgacac tgtcgtcatt ccatgctttg ttactaatat 241 ggaggcacaa aacactactg aagtatacgt aaagtggaaa tttaaaggaa gagatattta 301 cacctttgat ggagctctaa acaagtccac tgtccccact gactttagta gtgcaaaaat 361 tgaagtctca caattactaa aaggagatgc ctctttgaag atggataaga gtgatgctgt 421 ctcacacaca ggaaactaca cttgtgaagt aacagaatta accagagaag gtgaaacgat 481 catcgagcta aaatatcgtg ttgtttcatg gttttctcca aatgaaaata ttcttattgt 541 tattttccca atttttgcta tactcctgtt ctggggacag tttggtatta aaacacttaa 601 atatagatcc ggtggtatgg atgagaaaac aattgcttta cttgttgctg gactagtgat 661 cactgtcatt gtcattgttg gagccattct tttcgtccca ggtgaatatt cattaaagaa 721 tgctactggc cttggtttaa ttgtgacttc tacagggata ttaatattac ttcactacta 781 tgtgtttagt acagcgattg gattaacctc cttcgtcatt gccatattgg ttattcaggt 841 gatagcctat atcctcgctg tggttggact gagtctctgt attgcggcgt gtataccaat 901 gcatggccct cttctgattt caggtttgag tatcttagct ctagcacaat tacttggact 961 agtttatatg aaatttgtgg cttccaatca gaagactata caacctccta ggaataactg 1021 aagtgaagtg atggactccg atttggagag tagtaagacg tgaaaggaat acacttgtgt 1081 ttaagcacca tggccttgat gattcactgt tggggagaag aaacaagaaa agtaactggt 1141 tgtcacctat gagaccctta cgtgattgtt agttaagttt ttattcaaag cagctgtaat 1201 ttagttaata aaataattat gatctatgtt gtttgcccaa aaaaaaaaaa aaaaaaaaaa 1261 aaaaaaaaaa aaa //