LOCUS BC012850 2849 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens Kv channel interacting protein 3, calsenilin, mRNA (cDNA clone MGC:18289 IMAGE:4179275), complete cds. ACCESSION BC012850 VERSION BC012850.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2849) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2849) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: i Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27894379. FEATURES Location/Qualifiers source 1..2849 /db_xref="H-InvDB:HIT000035994" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:18289 IMAGE:4179275" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2849 /gene="KCNIP3" /gene_synonym="DREAM" /gene_synonym="KCHIP3" /gene_synonym="MGC18289" /db_xref="GeneID:30818" /db_xref="HGNC:HGNC:15523" /db_xref="MIM:604662" CDS 35..805 /gene="KCNIP3" /gene_synonym="DREAM" /gene_synonym="KCHIP3" /gene_synonym="MGC18289" /codon_start=1 /product="Kv channel interacting protein 3, calsenilin" /protein_id="AAH12850.1" /db_xref="GeneID:30818" /db_xref="HGNC:HGNC:15523" /db_xref="MIM:604662" /translation="MQPAKEVTKASDGSLLGDLGHTPLSKKEGIKWQRPRLSRQALMR CCLVKWILSSTAPQGSDSSDSELELSTVRHQPEGLDQLQAQTKFTKKELQSLYRGFKN ECPTGLVDEDTFKLIYAQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLR GTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERF FEKMDRNQDGVVTIEEFLEACQKDENIMSSMQLFENVI" BASE COUNT 613 a 881 c 845 g 510 t ORIGIN 1 gggaggctgg caacagtttt cttcagcgcc caggatgcag ccggctaagg aagtgacaaa 61 ggcgtcggac ggcagcctcc tgggggacct cgggcacaca ccacttagca agaaggaggg 121 tatcaagtgg cagaggccga ggctcagccg ccaggctttg atgagatgct gcctggtcaa 181 gtggatcctg tccagcacag ccccacaggg ctcagatagc agcgacagtg agctggagct 241 gtccacggtg cgccaccagc cagaggggct ggaccagctg caggcccaga ccaagttcac 301 caagaaggag ctgcagtctc tctacagggg ctttaagaat gagtgtccca cgggcctggt 361 ggacgaagac accttcaaac tcatttacgc gcagttcttc cctcagggag atgccaccac 421 ctatgcacac ttcctcttca acgcctttga tgcggacggg aacggggcca tccactttga 481 ggactttgtg gttggcctct ccatcctgct gcggggcaca gtccacgaga agctcaagtg 541 ggcctttaat ctctacgaca ttaacaagga tggctacatc accaaagagg agatgctggc 601 catcatgaag tccatctatg acatgatggg ccgccacacc taccccatcc tgcgggagga 661 cgcgccggcg gagcacgtgg agaggttctt cgagaaaatg gaccggaacc aggatggggt 721 agtgaccatt gaagagttcc tggaggcctg tcagaaggat gagaacatca tgagctccat 781 gcagctgttt gagaatgtca tctaggacac gtccaaagga gtgcatggcc acagccacct 841 ccacccccaa gaaacctcca tcctgccagg agcagcctcc aagaaacttt taaaaaatag 901 atttgcaaaa agtgaacaga ttgctacaca cacacacaca cacacacaca cacacacaca 961 cacagccatt catctgggct ggcagagggg acagagttca gggaggggct gagtctggct 1021 aggggccgag tccaggagcc ccagccagcc cttcccaggc cagcgaggcg aggctgcctc 1081 tgggtgagtg gctgacagag caggtctgca ggccaccagc tgctggatgt caccaagaag 1141 gggctcgagt gcccctgcag gggagggtcc aatctccggt gtgagcccac ctcgtcccgt 1201 tctccattct gctttcttgc cacacagtgg gccggcccca ggctcccctg gtctcctccc 1261 cgtagccact ctctgcccac tacctatgct tctagaaagc ccctcacctc aggaccccag 1321 agggaccagc tggggggcag gggggagagg gggtaatgga ggccaagcct gcagctttct 1381 ggaaattctt ccctgggggt cccaggatcc cctgctactc cactgacctg gaagagctgg 1441 gtaccaggcc acccactgtg gggcaagcct gagtggtgag gggccactgg gccccattct 1501 ccctccatgg caggaaggcg ggggatttca agtttaggga ttgggtcgtg gtggagaatc 1561 tgagggcact ctctgccagc tccacagggt gggatgagcc tctccttgcc ccagtcctgg 1621 ttcagtggga atgcagtggg tggggctgta cacaccctcc agcacagact gttccctcca 1681 aggtcctctt aggtcccggg aggaacgtgg ttcagagact ggcagccagg gagcccgggg 1741 cagagctcag aggagtctgg gaaggggcgt gtccctcctc ttcctgtagt gcccctccca 1801 tggcccagca gcttggctga gccccctctc ctgaagcagt gtcgccgtcc ctctgccttg 1861 cacaaaaagc acaagcattc cttagcagct caggcgcagc cctagtggga gcccagcaca 1921 ctgcttctcg gaggccaggc cctcctgctg gctgaggctt gggcccagta gccccaatat 1981 ggtggccctg gggaagaggc cttgggggtc tgctctgtgc ctgggatcag tggggcccca 2041 aagcccagcc cggctgacca acattcaaaa gcacaaaccc tggggactct gcttggctgt 2101 cccctccatc tggggatgga gaatgccagc ccaaagctgg agccaatggt gagggctgag 2161 agggctgtgg ctgggtggtc agcagaaacc cccaggagga gagagatgct gctcccgcct 2221 gattggggcc tcacccagaa ggaacccggt cccaggccgc atggcccctc caggaacatt 2281 cccacataat acattccatc acagccagcc cagctccact cagggctggc ccggggagtc 2341 cccgtgtgcc ccaagaggct agccccaggg tgagcagggc cctcagagga aaggcagtat 2401 ggcggaggcc atgggggccc ctcggcattc acacacagcc tggcctcccc tgcggagctg 2461 catggacgcc tggctccagg ctccaggctg actgggggcc tctgcctcca ggagggcatc 2521 agctttccct ggctcaggga tcttctccct cccctcaccc gctgcccagc cctcccagct 2581 ggtgtcactc tgcctctaag gccaaggcct caggagagca tcaccaccac acccctgccg 2641 gccttggcct tggggccaga ctggctgcac agcccaacca ggaggggtct gcctcccacg 2701 ctgggacaca gaccggccgc atgtctgcat ggcagaagcg tctcccttgg ccacggcctg 2761 ggagggtggt tcctgttctc agcatccact aatattcagt cctgtatatt ttaataaaat 2821 aaacttgaca aaggaaaaaa aaaaaaaaa //