LOCUS BC012532 1527 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 11, mRNA (cDNA clone MGC:13317 IMAGE:4096572), complete cds. ACCESSION BC012532 VERSION BC012532.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1527) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1527) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 19 Row: e Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 14790145. FEATURES Location/Qualifiers source 1..1527 /db_xref="H-InvDB:HIT000035855" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:13317 IMAGE:4096572" /tissue_type="Bone marrow, chronic myelogenous leukemia" /clone_lib="NIH_MGC_54" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1527 /gene="CXCL11" /gene_synonym="b-R1" /gene_synonym="H174" /gene_synonym="I-TAC" /gene_synonym="IP-9" /gene_synonym="IP9" /db_xref="GeneID:6373" /db_xref="HGNC:HGNC:10638" /db_xref="MIM:604852" CDS 215..499 /gene="CXCL11" /gene_synonym="b-R1" /gene_synonym="H174" /gene_synonym="I-TAC" /gene_synonym="IP-9" /gene_synonym="IP9" /codon_start=1 /product="chemokine (C-X-C motif) ligand 11" /protein_id="AAH12532.1" /db_xref="GeneID:6373" /db_xref="HGNC:HGNC:10638" /db_xref="MIM:604852" /translation="MSVKGMAIALAVILCATVVQGFPMFKRGRCLCIGPGVKAVKVAD IEKASIMYPSNNCDKIEVIITLKENKGQRCLNPKSKQARLIIKKVERKNF" BASE COUNT 548 a 256 c 275 g 448 t ORIGIN 1 ggggagagaa caaaacagaa actcttggaa gcaggaaagg tgcatgactc aaagagggaa 61 attcctgtgc cataaaagga ttgctggtgt ataaaatgct ctatatatgc caattaccaa 121 tttcctttca tgttcagcat ttctactcct tccaagaaga gcagcaaagc tgaagtagca 181 gcaacagcac cagcagcaac agcaaaaaac aaacatgagt gtgaagggca tggctatagc 241 cttggctgtg atattgtgtg ctacagttgt tcaaggcttc cccatgttca aaagaggacg 301 ctgtctttgc ataggccctg gggtaaaagc agtgaaagtg gcagatattg agaaagcctc 361 cataatgtac ccaagtaaca actgtgacaa aatagaagtg attattaccc tgaaagaaaa 421 taaaggacaa cgatgcctaa accccaaatc gaagcaagca aggcttataa tcaaaaaagt 481 tgaaagaaag aatttttaaa aatatcaaaa catatgaagt cctggaaaag ggcatctgaa 541 aaacctagaa caagtttaac tgtgactact gaaatgacaa gaattctaca gtaggaaact 601 gagacttttc tatggttttg tgactttcaa cttttgtaca gttatgtgaa ggatgaaagg 661 tgggtgaaag gaccaaaaac agaaatacag tcttcctgaa tgaatgacaa tcagaattcc 721 actgcccaaa ggagtccaac aattaaatgg atttctagga aaagctacct taagaaaggc 781 tggttaccat cggagtttac aaagtgcttt cacgttctta cttgttgtat tatacattca 841 tgcatttcta ggctagagaa ccttctagat ttgatgctta caactattct gttgtgacta 901 tgagaacatt tctgtctcta gaagttatct gtctgtattg atctttatgc tatattacta 961 tctgtggtta cagtggagac attgacatta ttactggagt caagccctta taagtcaaaa 1021 gcatctatgt gtcgtaaagc attcctcaaa cattttttca tgcaaataca cacttctttc 1081 cccaaatatc atgtagcaca tcaatatgta gggaaacatt cttatgcatc atttggtttg 1141 ttttataacc aattcattaa atgtaattca taaaatgcac tatgaaaaaa attatatgct 1201 atgggatact ggcaacagtg cacatatttc ataaccaaat tagcagcacc ggtcttaatt 1261 tgatgttttt caacttttat tcattgagat gttttgaagc aattaggata tgtgtgttta 1321 ctgtactttt tgttttgatc cgtttgtata aatgatagca atatcttgga cacatttgaa 1381 atacaaaatg tttttgtcta ccaaagaaaa atgttgaaaa ataagcaaat gtatacctag 1441 caatcacttt tactttttgt aattctgtct cttagaaaaa tacataatct aatcaacaaa 1501 aaaaaaaaaa aaaaaaaaaa aaaaaaa //