LOCUS       BC012422                1422 bp    mRNA    linear   HUM 30-DEC-2006
DEFINITION  Homo sapiens vacuolar protein sorting 16 homolog (S. cerevisiae),
            mRNA (cDNA clone IMAGE:3865353), partial cds.
ACCESSION   BC012422
VERSION     BC012422.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1422)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1422)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-AUG-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 21 Row: k Column: 11
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 18450367.
FEATURES             Location/Qualifiers
     source          1..1422
                     /db_xref="H-InvDB:HIT000087848"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3865353"
                     /tissue_type="Ovary, adenocarcinoma"
                     /clone_lib="NIH_MGC_66"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            <1..1422
                     /gene="VPS16"
                     /gene_synonym="hVPS16"
                     /db_xref="GeneID:64601"
                     /db_xref="HGNC:HGNC:14584"
                     /db_xref="MIM:608550"
     CDS             <1..1249
                     /gene="VPS16"
                     /gene_synonym="hVPS16"
                     /codon_start=2
                     /product="VPS16 protein"
                     /protein_id="AAH12422.1"
                     /db_xref="GeneID:64601"
                     /db_xref="HGNC:HGNC:14584"
                     /db_xref="MIM:608550"
                     /translation="LRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQ
                     ICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARA
                     YGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNE
                     LNRGDFFMTLRNQPMALSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEE
                     RIEGRVAALQTAADAFYKAKNEFAAKATEDQMRLLRLQRRLEDELGGLQLDLSLHDTV
                     TTLILGGHNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLP
                     FVEICMKQHNKYEAKKYASRVGPEQKVKALLLVGDVAQAADVAIEHRNEADLSLVLSH
                     CTGATDGATADKIQRARAQAQKK"
BASE COUNT          360 a          371 c          404 g          287 t
ORIGIN      
        1 cctgcgtgtg ctcaatgctg ttcgggacta tcacatcggg atcccgctca cctatagcca
       61 atataagcag ctcaccatcc aggtgctgct ggacaggctc gtgttgcgga gactttaccc
      121 cctggccatc cagatatgcg agtacttgcg ccttcctgaa gtacagggcg tcagcaggat
      181 cctggcccac tgggcctgct acaaggtgca acagaaggat gtctcagatg aggatgtggc
      241 tcgagccatt aaccagaagc tgggggacac gcctggtgtc tcttactccg acattgctgc
      301 acgagcctat ggttgtggcc gcacggagct ggccatcaag ctgctggagt atgagccacg
      361 ctcaggggag caggtacccc ttctcctaaa gatgaagagg agcaaactgg cactaagcaa
      421 ggccatcgag agcggggaca ctgacctggt gttcacggtg ttgctgcacc tgaagaacga
      481 gctgaaccga ggagattttt tcatgaccct tcggaatcag cccatggccc tcagtttgta
      541 ccgacagttc tgtaagcatc aggagctaga gacgctgaag gacctttaca atcaggatga
      601 caatcaccag gaattgggca gcttccacat ccgagccagc tatgctgcag aagagcgtat
      661 tgaggggcga gtagcagctc tgcagacagc cgccgatgcc ttctacaagg ccaagaatga
      721 gtttgcagcc aaggctacag aggatcaaat gcggctccta cggctgcagc ggcgcctaga
      781 agacgagctg gggggcttgc agttagacct gtctctacat gacacagtta ccaccctcat
      841 tcttggcggt cacaacaagc gtgcagagca gctggcacgt gacttccgca tccctgacaa
      901 gaggctctgg tggctgaagc tgactgccct ggcagatttg gaagattggg aagagctaga
      961 gaagttttcc aagagcaaga aatcacccat tggctacctg ccttttgtgg agatctgcat
     1021 gaaacaacat aacaaatacg aagccaagaa gtatgcttcc cgcgtgggtc ccgagcagaa
     1081 ggtcaaggct ttgcttcttg ttggcgatgt ggctcaggct gcagatgtgg ccatcgaaca
     1141 ccggaatgag gctgatctga gcctcgtatt gtcccactgc acgggagcca cagatggggc
     1201 cacagctgac aagattcaac gggccagggc acaagcccag aagaagtgag gagtccatcc
     1261 tgtacatctc aagcaagggg ttcctcccct agcacctggg cttggcagaa gggccatagt
     1321 tcatccagct cctcccctag agcaatgctg aggagcgggg gcatggtagc agggctgtct
     1381 ggttttaaat aaagttggaa cacctaaaaa aaaaaaaaaa aa
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