LOCUS BC012419 1157 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens CD40 molecule, TNF receptor superfamily member 5, mRNA (cDNA clone MGC:9013 IMAGE:3856903), complete cds. ACCESSION BC012419 VERSION BC012419.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1157) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1157) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 21 Row: a Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23312369. FEATURES Location/Qualifiers source 1..1157 /db_xref="H-InvDB:HIT000035807" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:9013 IMAGE:3856903" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_66" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1157 /gene="CD40" /gene_synonym="Bp50" /gene_synonym="CDW40" /gene_synonym="MGC9013" /gene_synonym="p50" /db_xref="GeneID:958" /db_xref="HGNC:HGNC:11919" /db_xref="MIM:109535" CDS 58..891 /gene="CD40" /gene_synonym="Bp50" /gene_synonym="CDW40" /gene_synonym="MGC9013" /gene_synonym="p50" /codon_start=1 /product="CD40 molecule, TNF receptor superfamily member 5" /protein_id="AAH12419.1" /db_xref="GeneID:958" /db_xref="HGNC:HGNC:11919" /db_xref="MIM:109535" /translation="MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPG QKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTI CTCEEGWHCTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEK CHPWTSCETKDLVVQQAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKV AKKPTNKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQER Q" BASE COUNT 278 a 335 c 310 g 234 t ORIGIN 1 gtcagcagag gcctcgctcg ggcgcccagt ggtcctgccg cctggtctca cctcgctatg 61 gttcgtctgc ctctgcagtg cgtcctctgg ggctgcttgc tgaccgctgt ccatccagaa 121 ccacccactg catgcagaga aaaacagtac ctaataaaca gtcagtgctg ttctttgtgc 181 cagccaggac agaaactggt gagtgactgc acagagttca ctgaaacgga atgccttcct 241 tgcggtgaaa gcgaattcct agacacctgg aacagagaga cacactgcca ccagcacaaa 301 tactgcgacc ccaacctagg gcttcgggtc cagcagaagg gcacctcaga aacagacacc 361 atctgcacct gtgaagaagg ctggcactgt acgagtgagg cctgtgagag ctgtgtcctg 421 caccgctcat gctcgcccgg ctttggggtc aagcagattg ctacaggggt ttctgatacc 481 atctgcgagc cctgcccagt cggcttcttc tccaatgtgt catctgcttt cgaaaaatgt 541 cacccttgga caagctgtga gaccaaagac ctggttgtgc aacaggcagg cacaaacaag 601 actgatgttg tctgtggtcc ccaggatcgg ctgagagccc tggtggtgat ccccatcatc 661 ttcgggatcc tgtttgccat cctcttggtg ctggtcttta tcaaaaaggt ggccaagaag 721 ccaaccaata aggcccccca ccccaagcag gaaccccagg agatcaattt tcccgacgat 781 cttcctggct ccaacactgc tgctccagtg caggagactt tacatggatg ccaaccggtc 841 acccaggagg atggcaaaga gagtcgcatc tcagtgcagg agagacagtg aggctgcacc 901 cacccaggag tgtggccacg tgggcaaaca ggcagttggc cagagagcct ggtgctgctg 961 ctgctgtggc gtgagggtga ggggctggca ctgactgggc atagctcccc gcttctgcct 1021 gcacccctgc agtttgagac aggagacctg gcactggatg cagaaacagt tcaccttgaa 1081 gaacctctca cttcaccctg gagcccatcc agtctcccaa cttgtattaa agacagaggc 1141 agaaaaaaaa aaaaaaa //