LOCUS BC012333 2228 bp mRNA linear HUM 25-JAN-2007 DEFINITION Homo sapiens sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like, mRNA (cDNA clone MGC:2084 IMAGE:3537285), complete cds. ACCESSION BC012333 VERSION BC012333.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2228) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2228) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 8 Row: p Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68160944. FEATURES Location/Qualifiers source 1..2228 /db_xref="H-InvDB:HIT000035762" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:2084 IMAGE:3537285" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2228 /gene="SC5DL" /gene_synonym="ERG3" /gene_synonym="S5DES" /gene_synonym="SC5D" /db_xref="GeneID:6309" /db_xref="HGNC:HGNC:10547" /db_xref="MIM:602286" CDS 190..1089 /gene="SC5DL" /gene_synonym="ERG3" /gene_synonym="S5DES" /gene_synonym="SC5D" /codon_start=1 /product="sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like" /protein_id="AAH12333.1" /db_xref="GeneID:6309" /db_xref="HGNC:HGNC:10547" /db_xref="MIM:602286" /translation="MDLVLRVADYYFFTPYVYPATWPEDDIFRQAISLLIVTNVGAYI LYFFCATLSYYFVFDHALMKHPQFLKNQVRREIKFTVQALPWISILTVALFLLEIRGY SKLHDDLGEFPYGLFELVVSIISFLFFTDMFIYWIHRGLHHRLVYKRLHKPHHIWKIP TPFASHAFHPIDGFLQSLPYHIYPFIFPLHKVVYLSLYILVNIWTISIHDGDFRVPQI LQPFINGSAHHTDHHMFFDYNYGQYFTLWDRIGGSFKNPSSFEGKGPLSYVKEMTEGK RSSHSGNGCKNEKLFNGEFTKTE" BASE COUNT 694 a 397 c 425 g 712 t ORIGIN 1 agagacttca gcgcctggga ctcgggtggg cgaggcggaa ggtgtcctcg cagcacggct 61 tttctccgcg ccgcggttgg ttagcgagtg ccctctgggt gctaggcgtt gggcggatgg 121 taggatcgcg gtagcatacg gatccgagtc ctgcgccgag tgagaggaga ggctggcagg 181 ggctaagtga tggatcttgt actccgtgtt gcagattact atttttttac accatacgtg 241 tatccagcca catggccaga agatgacatc ttccgacaag ctattagtct tctgattgta 301 acaaatgttg gtgcttacat cctttatttc ttctgtgcaa cactgagcta ttattttgtc 361 ttcgatcatg cattaatgaa acatccacaa tttttaaaga atcaagtccg tcgagagatt 421 aagtttactg tccaggcatt gccatggata agtattctta ctgttgcact gttcttgctg 481 gagataagag gttacagcaa attacatgat gacctaggag agtttccata tggattgttt 541 gaacttgtcg ttagtataat atctttcctc tttttcactg acatgttcat ctactggatt 601 cacagaggcc ttcatcatag actggtatat aagcgcctac ataaacctca ccatatttgg 661 aagattccta ctccatttgc aagtcatgct tttcacccta ttgatggctt tcttcagagt 721 ctaccttacc atatataccc ttttatcttt ccattacaca aggtggttta tttaagtctg 781 tacatcttgg ttaatatctg gacaatttcc attcatgacg gtgattttcg tgtcccccaa 841 atcttacagc catttattaa tggctcagct catcatacag accaccatat gttctttgac 901 tataattatg gacaatattt cactttgtgg gataggattg gcggctcatt caaaaatcct 961 tcatcctttg aggggaaggg accgctcagt tatgtgaagg agatgacaga gggaaagcgc 1021 agcagccatt caggaaatgg ctgtaagaat gaaaaattat tcaatggaga gtttacaaag 1081 actgaataga ttattgccca gttattctta agtaaggaca aagaaggaaa tatcatcgta 1141 tttctttttt ttaataagga aaaaataata tccatacagt caagatacat agtaaatggt 1201 atcatttgga aatcagcatc gtgggcactg ctgaggaatg atcctagtgg taggtcagaa 1261 gaagatgctg tgaacaccag gactttaatc ttatgcttaa aatgccagat gttgttcggg 1321 ggacaacttg tatctttcta gcagcagatc tgtagtttgt atagcctcaa caacaatttt 1381 aaataagatg gagaataaat tattgagggg actaggctat atgcatttgc cttcatccac 1441 ccatgtttat taagaatcat tgtgcttaat aataccaaga ctaagcacca taaccaagaa 1501 atactaatgt aaagattgtt tcttgtttca ggaatggtta attcttcaac gttggtatga 1561 taatgataac ttgttttgac ttgaataaag tactacatca gtgtggaaaa aaattctgat 1621 acattagcag ctatgtaaat gacctaattg atagcaggtg taataagact atcgtcttcc 1681 tacacatagg aggctcattc tctggacaca ctatcaccta ttacatttta ctgattaaca 1741 aataaattgg aatttaaaaa tatcgatatc accatgattt aatccagatc tgggattatg 1801 tagctaaaca ttgtgatgat tattatttaa aaccattatt taataagagt aaaaatatgt 1861 gaatctggat atatttaaaa aaagaaattt gatgcccaga taatatatta ggcactactg 1921 attttttagt taaattgatg cactacactt ttgatgtttg aagttacaaa cctgtaattt 1981 ttttgtaaag gaaataattg ccaaatacct aggcccattg ctgacgatta gttctaaaat 2041 cttattcctc ctcttctccc ctcacttttc cctacttcct ctgcaaaaag atttaacaaa 2101 tacattcata aggaaatgtg tgttgtaaca aatatattgc aaaaacatag tttgtaaagg 2161 cattctataa gctatttatg taaaatcaat aaaagttgat cataattaaa aaaaaaaaaa 2221 aaaaaaaa //