LOCUS BC012142 3033 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2, mRNA (cDNA clone MGC:20253 IMAGE:4647654), complete cds. ACCESSION BC012142 VERSION BC012142.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3033) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3033) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: n Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 47717097. FEATURES Location/Qualifiers source 1..3033 /db_xref="H-InvDB:HIT000035690" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20253 IMAGE:4647654" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3033 /gene="ATP6V1C2" /gene_synonym="ATP6C2" /gene_synonym="VMA5" /db_xref="GeneID:245973" /db_xref="HGNC:HGNC:18264" CDS 21..1166 /gene="ATP6V1C2" /gene_synonym="ATP6C2" /gene_synonym="VMA5" /codon_start=1 /product="ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2" /protein_id="AAH12142.1" /db_xref="GeneID:245973" /db_xref="HGNC:HGNC:18264" /translation="MSEFWLISAPGDKENLQALERMNTVTSKSNLSYNTKFAIPDFKV GTLDSLVGLSDELGKLDTFAESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLTSFVT HFEWDMAKYPVKQPLVSVVDTIAKQLAQIEMDLKSRTAAYDTLKTNLENLEKKSMGNL FTRTLSDIVSKEDFVLDSEYLVTLLVIVPKPNYSQWQKTYESLSDMVVPRSTKLITED KEGGLFTVTLFRKVIEDFKTKAKENKFTVREFYYDEKEIEREREEMARLLSDKKQQYG PLLRWLKVNFSEAFIAWIHIKALRVFVESVLRYGLPVNFQAVLLQPHKKSSTKRLREV LNSVFRHLDEVAATSILDASVEIPGLQLNNQDYFPYVYFHIDLSLLD" BASE COUNT 932 a 674 c 648 g 779 t ORIGIN 1 ggtaagagaa gactggaagc atgtcggagt tttggttaat ttctgcccct ggcgataagg 61 aaaatttgca agctctggag aggatgaata ctgtaacctc caagtccaac ctgtcttata 121 ataccaaatt cgctattcct gacttcaagg tggggacctt ggattccctg gttggcctct 181 ctgatgagtt ggggaaactc gacacctttg ctgaaagcct cataaggaga atggctcaga 241 gcgtggtgga agtcatggag gactcaaagg ggaaggtcca ggagcacctc ctggcaaacg 301 gagttgactt aacatccttt gtgacccact ttgaatggga catggccaaa tatcctgtca 361 agcagccgct cgtgagtgtg gtggacacaa tagccaagca actggcgcag atcgagatgg 421 acctgaagtc ccgaacggcc gcctacgaca ctctgaagac aaacctggag aacctggaaa 481 agaaatccat ggggaacctc ttcacccgga cactgagtga tattgtgagc aaagaggact 541 tcgtgctgga ttctgaatat ctcgtcacac ttctggtcat cgtccccaaa ccaaactact 601 cacaatggca aaaaacctac gaatctctct cagacatggt ggtccctcga tcaaccaaac 661 tcattactga ggacaaggaa gggggccttt tcactgtgac tctgtttcga aaagtgattg 721 aagatttcaa aaccaaggcc aaagaaaaca agttcactgt tcgtgaattt tactatgatg 781 agaaggaaat tgaaagggaa agggaggaga tggccagatt gctgtctgat aagaagcaac 841 agtatggccc cctgctgcgc tggctcaagg tgaacttcag tgaagccttc attgcctgga 901 tccacatcaa ggccctgaga gtgtttgtgg agtccgtgct caggtatgga ctaccagtga 961 acttccaggc agtgctcctg cagccgcata agaagtcatc caccaagcgt ttaagagagg 1021 ttctaaactc tgtcttccga catctggatg aagtagccgc tacaagtata ctggatgcat 1081 ctgtggagat cccgggactg caactcaata accaagacta ttttccttat gtctacttcc 1141 atattgacct tagtcttctt gactagaaag gccagctggc acctctgtct catgttcgtg 1201 cagattatta cagacacctc tttcctttag ccagagaatg gttcaaatgt cttacagaac 1261 taagatcttt ttcagagaaa ttgctcacaa aagttagtga cagttgtatt tattttttta 1321 agttacaata aaatgctctc aagtcctttg aatgttccaa caaattcaaa acttcatttt 1381 ctgaatgttt tacataaatg cgaactacct gttcgcattg gtaacctgct gctgtatttc 1441 atgtcttaac ggctattttg aggttcatta acaacataga aagccttgaa ctgtataacc 1501 agctagattc cttaataatt agtcactaga gacagcccaa agacaaatat tgggcaggaa 1561 atcagttctc actgagcccg gtttccatgt aaaatctctg ttgtggtggg cataggtggc 1621 accatctaaa gaaaagaggt cttgtttttt gtttaaaaaa gtttgtgggg aggaaagaca 1681 tctgtgtatc acttcaaaat attgatttac tgctaaacat cactctgaat ttatgatgtg 1741 gatactaact tcatacattt atcggcattg tccaaaatat tttattcttt aatggaaaaa 1801 gccattaata ttcaaatgaa gggatcacat taaaaaaaac ccatacataa gaaacagcct 1861 ccaagaacat tcaagcagca gtcagagaga aaaatgtttc gacagccaag ttttcttcaa 1921 aatattatgt gacagaatac gactcaattc accggctaca acaattcata gaatttttca 1981 atgttttctt gagatgcaaa agttcactgt tgcagtgttt tcaaatgacc aatcaagtac 2041 tacttcttgg ttaaaaggcc actggtagag tcatctgagt gtagagaatg tcccttcact 2101 gctggaaaaa tccactggct cccaagaaaa gaaaatggtc tgaagcctct gttgtggctc 2161 tcacaactca tctttcccta agtcatcaag ctccacatca ctgaggtcaa tgtcatcctc 2221 cacgggaagc tgggagacga cagaaagcca ctgttagatc tgcagaaggg gacaccctgg 2281 aaggtcaaca tctcatttta tggaagagcg actctctgga gctactcctg ctacaatcca 2341 ggttctcctc agtctgactc ctaccctgac cttcgtacct atgattatac ggatggaaaa 2401 gctcagaact caggtgaaac atttcaacat cacatcactc accattttaa cactggaagc 2461 cacttgaacg tgtccttttg aggagggtgg gacacaacag tacagaaata agtgctaatt 2521 tcaaagctat cattttctat ttttctaaga taaagtaaat gaattccagg ttaaatgttc 2581 actttaaggt aataatcagg aaagcaacct tactactgaa atgtatcttg gctgtcaaga 2641 gtatcaaatg ccatgcagca cttaaacttg tgataaggaa gatgaagggt cttcagagaa 2701 gaacctctta aaaggcccac gggtgcacca gggctgaggt ctgatgggaa ggacttgact 2761 ccaggtgcag agatgcacag gctcaagaga gtaaaccagg actgctgccc gcacagcttc 2821 cctcccgggc actcacctcg ccatccctgc cgtcccaagg ctctctctca acgatggtag 2881 ggaaagcccc gcctcctaca ggtgccgtgg agccacgccc aaaagagagc tcccttaggg 2941 aaaaatgacc aaaacacaca cacacattta caatggactg ctggtgcaga agaataaaca 3001 actttaaaaa taaaaaaaaa aaaaaaaaaa aaa //