LOCUS BC012115 2289 bp mRNA linear HUM 04-OCT-2003 DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 5, mRNA (cDNA clone MGC:20128 IMAGE:4684829), complete cds. ACCESSION BC012115 VERSION BC012115.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2289) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2289) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: p Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21361412. FEATURES Location/Qualifiers source 1..2289 /db_xref="H-InvDB:HIT000035670" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20128 IMAGE:4684829" /tissue_type="Skin, melanoma, amelanotic" /clone_lib="NIH_MGC_41" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2289 /gene="DNAJB5" /gene_synonym="Hsc40" /db_xref="GeneID:25822" CDS 105..1265 /gene="DNAJB5" /gene_synonym="Hsc40" /codon_start=1 /product="DNAJB5 protein" /protein_id="AAH12115.1" /db_xref="GeneID:25822" /translation="MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEK FKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHGDPHATFASFF GGSNPFDIFFASSRSTRPFSGFDPDDMDVDEDEDPFGAFGRFGFNGLSRGPRRAPEPL YPRRKVQDPPVVHELRVSLEEIYHGSTKRMKITRRRLNPDGRTVRTEDKILHIVIKRG WKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCGC TVNIPTIDGRVIPLPCNDVIKPGTVKRLRGEGLPFPKVPTQRGDLIVEFKVRFPDRLT PQTRQILKQQYPQHSLHSMCTQLDVHWTLATFSKMQKKATGFQENVPVPDPF" misc_feature 105..695 /gene="DNAJB5" /gene_synonym="Hsc40" /note="DnaJ; Region: DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]" /db_xref="CDD:COG0484" BASE COUNT 567 a 614 c 605 g 503 t ORIGIN 1 cggagccgga gccgggggag ggggcagcgg ctgtctcacg gaccacggcg gcgcccgcag 61 ctcctcaccg aaacaaggag accagtgctg gtccagtggc tgtgatggga aaagattatt 121 acaagattct tgggatccca tcgggggcca acgaggatga gatcaagaaa gcctaccgga 181 agatggcctt gaagtaccac ccagacaaga ataaagaacc caacgctgag gagaagttta 241 aggagattgc agaggcctat gatgtgctaa gtgaccccaa gaaacggggc ctgtatgacc 301 agtatgggga ggaaggcctg aagaccggcg gtggcacatc aggtggctcc agtggctcct 361 ttcactacac ctttcatggg gacccccatg ccacctttgc ctccttcttt ggtggctcca 421 accccttcga tatcttcttt gccagcagcc gctccactcg gcccttcagt ggctttgacc 481 cagatgacat ggatgtggat gaagatgagg acccatttgg cgctttcggc cgttttggct 541 tcaatgggct gagtaggggt ccaaggcgag ccccagaacc actgtaccct cggcgcaagg 601 tgcaggaccc cccagtggtg cacgagctgc gggtgtccct ggaggagatc taccatggct 661 ccaccaagcg catgaagatc acaaggcgtc gcctcaaccc tgatgggcga actgtgcgca 721 ccgaggacaa gatcctgcac atagtcatca agcgtggctg gaaggaaggc accaagatca 781 ccttccccaa agaaggcgac gccacacctg acaacatccc tgctgacatc gtctttgtgc 841 tcaaagacaa gccccatgca cacttccgcc gagatggcac caacgtgctc tacagtgccc 901 tgatcagcct caaggaggcg ctgtgtggct gcactgtgaa cattcccact atcgacggcc 961 gagtgatccc tttgccctgc aatgatgtca tcaagccagg caccgtgaag agactccgtg 1021 gggagggcct tcccttcccc aaagtgccaa ctcagcgagg agacctcatt gttgagttca 1081 aagttcgctt cccagacaga ttaacaccac agacaagaca gatccttaag cagcaatacc 1141 cccaacactc actccactca atgtgcaccc agcttgatgt ccactggaca ctggcaactt 1201 tttctaaaat gcaaaaaaaa gccactggtt ttcaggaaaa tgttcctgtc cctgacccct 1261 tttagagctg ggctgcctgg ggggagtggg agggaggtgg ggagagctag cccaggccag 1321 gggtcaatgt tcatgtcact agctttcaat ccagtttcca ctgcagtggc tggagagtga 1381 cctgagtgct acttgaagat atgtagagat tcgttatcca tgcctgtaca tagcatgtcc 1441 tcctcccctc agctttgcta ataccagtcc cctcccttcc ctttggcttc ctgctgttgg 1501 gggtggaaaa gactagaaag gacattgctt tctcagcccc acccccaggt ccacagtgtc 1561 caaggtaatg gcacacatat tcatgcacaa gaagcactca cctagagctg tctgtgcctc 1621 tctgggagaa aggagagagg ataagaaggg aaagttcaca acctgtgaac agggacttga 1681 gcacgagaca cttttcatct ggagcagggg ggtgagctcc tcagcagcct ccgtaacagc 1741 tgccctgcct acacctgcag agctggaggt tctgtcctcc ctgctgctct caggagtgtt 1801 caagggtgga gggcagggaa tggggcctga ggtattaagg ctaagaggtg ggggacaggg 1861 cccatctacc agccttcatc aggaagggaa agggctttgg ggtcaggtgg cagctattcc 1921 ccaccaagag attcagggtc acaggttttt ccccacacct ctgaactcag ggcctagcca 1981 cccccaaact tccaaatccc acttttgtga tatgtgaagc tactcatttc ttacccttgg 2041 aggctgtgtg gggaatttcc agccctttta tgcctgtgtg atcccacccc acccccatag 2101 ttgtataaag gtcatagtga agaagctggg ggaagactgc ttcagccaga tcctggggtg 2161 gggtctttag gttttctcac tttgacaacc cccgaatgtt tttatagtag tttttttgta 2221 tttttttgta atgacagtat tatgtaaaaa ataaagtatt ttaaaaataa aaaaaaaaaa 2281 aaaaaaaaa //