LOCUS BC012096 1316 bp mRNA linear HUM 04-OCT-2003 DEFINITION Homo sapiens arrestin 3, retinal (X-arrestin), mRNA (cDNA clone MGC:20066 IMAGE:4645867), complete cds. ACCESSION BC012096 VERSION BC012096.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1316) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1316) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: m Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4757775. FEATURES Location/Qualifiers source 1..1316 /db_xref="H-InvDB:HIT000035655" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20066 IMAGE:4645867" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1316 /gene="ARR3" /gene_synonym="ARRX" /db_xref="GeneID:407" /db_xref="MIM:301770" CDS 99..1178 /gene="ARR3" /gene_synonym="ARRX" /codon_start=1 /product="ARR3 protein" /protein_id="AAH12096.1" /db_xref="GeneID:407" /db_xref="MIM:301770" /translation="MSKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYF KCRKLFVMLTCAFRYGRDDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLL HKLGDNAYPFTLQMVTNLPCSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDY VRLVVRKVQFAPPEAGPGPSAQTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSIN NCTNKVIKKIKISVDQITDVVLYSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILA ASCQKRGLALDGKLKHEDTNLASSTIIRPGMDKELLGILVSYKVRVNLMVSCGGILGD LTASDVGVELPLVLIHPKPSHEAAR" misc_feature 99..614 /gene="ARR3" /gene_synonym="ARRX" /note="arrestin; Region: Arrestin (or S-antigen), N-terminal domain. Ig-like beta-sandwich fold. Scop reports duplication with C-terminal domain" /db_xref="CDD:pfam00339" misc_feature 618..1163 /gene="ARR3" /gene_synonym="ARRX" /note="arrestin_C; Region: Arrestin (or S-antigen), C-terminal domain. Ig-like beta-sandwich fold. Scop reports duplication with N-terminal domain" /db_xref="CDD:pfam02752" BASE COUNT 352 a 340 c 325 g 299 t ORIGIN 1 aagaggctgg ggaggcaggc atagcaacca gagctggaga ctgatgtgaa cttcatctct 61 ctccccagaa aaggctcaac atcaactata tagccaacat gtccaaggtg tttaagaaga 121 ccagctccaa tgggaagctc tccatctacc tggggaaacg ggacttcgtg gaccatgtgg 181 acacggtgga acccattgac ggtgttgtcc tggttgatcc tgagtacttt aaatgtcgaa 241 agttgtttgt catgttgaca tgtgcctttc gctatggccg tgatgacttg gaagtgattg 301 gtctgacgtt ccgaaaagat ctgtatgtgc agaccctgca agtggtccca gctgaatcca 361 gcagccctca ggggcccctc acagtcctac aggagcgact actgcacaag ctaggggaca 421 atgcctaccc ctttaccctg cagatggtga ccaacctgcc ctgttctgtg acactgcagc 481 caggtcctga agatgcagga aagccctgtg ggattgactt tgaagtgaag agtttctgtg 541 ctgaaaaccc agaggagaca gtctccaaga gagactatgt gcggctggtt gtccggaaag 601 tacaatttgc accaccggag gcaggccctg gcccctcagc ccagaccatc cgccgcttcc 661 ttctgtcagc tcagccccta caactccagg cctggatgga cagggaggtt cactaccacg 721 gagaacccat ctctgtcaat gtttctatca acaactgcac caacaaggtc atcaaaaaaa 781 tcaagatttc agttgaccag atcacagatg ttgtcctgta ttcactagac aagtacacca 841 agactgtgtt cattcaggaa ttcacggaga ctgtagctgc taattccagc ttctcccaga 901 gctttgcagt aaccccaatc ctggctgcca gctgccagaa acggggcctg gcactggatg 961 gcaaacttaa gcatgaagat accaacctgg cctctagcac aattattaga ccgggaatgg 1021 acaaagagct gctggggatc ctggtgtcct acaaagtcag agtcaacctg atggtgtcct 1081 gtggtggcat cctaggagac ctgacagcca gcgatgttgg tgtggagcta cccttggtcc 1141 tgatccatcc gaagccatct catgaggccg ctaggtaatg gaatacaaga ttgggaagcc 1201 ccattcccct cttcccattt ccaccctcca tgttatgacg atagaaatgt gaaaatgctt 1261 ccttggggtg ctttcaatac atgtgcagtg gaaacataaa aaaaaaaaaa aaaaaa //