LOCUS BC012096 1316 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens arrestin 3, retinal (X-arrestin), mRNA (cDNA clone
MGC:20066 IMAGE:4645867), complete cds.
ACCESSION BC012096
VERSION BC012096.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1316)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1316)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-AUG-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: m Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4757775.
FEATURES Location/Qualifiers
source 1..1316
/db_xref="H-InvDB:HIT000035655"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20066 IMAGE:4645867"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1316
/gene="ARR3"
/gene_synonym="ARRX"
/db_xref="GeneID:407"
/db_xref="MIM:301770"
CDS 99..1178
/gene="ARR3"
/gene_synonym="ARRX"
/codon_start=1
/product="ARR3 protein"
/protein_id="AAH12096.1"
/db_xref="GeneID:407"
/db_xref="MIM:301770"
/translation="MSKVFKKTSSNGKLSIYLGKRDFVDHVDTVEPIDGVVLVDPEYF
KCRKLFVMLTCAFRYGRDDLEVIGLTFRKDLYVQTLQVVPAESSSPQGPLTVLQERLL
HKLGDNAYPFTLQMVTNLPCSVTLQPGPEDAGKPCGIDFEVKSFCAENPEETVSKRDY
VRLVVRKVQFAPPEAGPGPSAQTIRRFLLSAQPLQLQAWMDREVHYHGEPISVNVSIN
NCTNKVIKKIKISVDQITDVVLYSLDKYTKTVFIQEFTETVAANSSFSQSFAVTPILA
ASCQKRGLALDGKLKHEDTNLASSTIIRPGMDKELLGILVSYKVRVNLMVSCGGILGD
LTASDVGVELPLVLIHPKPSHEAAR"
misc_feature 99..614
/gene="ARR3"
/gene_synonym="ARRX"
/note="arrestin; Region: Arrestin (or S-antigen),
N-terminal domain. Ig-like beta-sandwich fold. Scop
reports duplication with C-terminal domain"
/db_xref="CDD:pfam00339"
misc_feature 618..1163
/gene="ARR3"
/gene_synonym="ARRX"
/note="arrestin_C; Region: Arrestin (or S-antigen),
C-terminal domain. Ig-like beta-sandwich fold. Scop
reports duplication with N-terminal domain"
/db_xref="CDD:pfam02752"
BASE COUNT 352 a 340 c 325 g 299 t
ORIGIN
1 aagaggctgg ggaggcaggc atagcaacca gagctggaga ctgatgtgaa cttcatctct
61 ctccccagaa aaggctcaac atcaactata tagccaacat gtccaaggtg tttaagaaga
121 ccagctccaa tgggaagctc tccatctacc tggggaaacg ggacttcgtg gaccatgtgg
181 acacggtgga acccattgac ggtgttgtcc tggttgatcc tgagtacttt aaatgtcgaa
241 agttgtttgt catgttgaca tgtgcctttc gctatggccg tgatgacttg gaagtgattg
301 gtctgacgtt ccgaaaagat ctgtatgtgc agaccctgca agtggtccca gctgaatcca
361 gcagccctca ggggcccctc acagtcctac aggagcgact actgcacaag ctaggggaca
421 atgcctaccc ctttaccctg cagatggtga ccaacctgcc ctgttctgtg acactgcagc
481 caggtcctga agatgcagga aagccctgtg ggattgactt tgaagtgaag agtttctgtg
541 ctgaaaaccc agaggagaca gtctccaaga gagactatgt gcggctggtt gtccggaaag
601 tacaatttgc accaccggag gcaggccctg gcccctcagc ccagaccatc cgccgcttcc
661 ttctgtcagc tcagccccta caactccagg cctggatgga cagggaggtt cactaccacg
721 gagaacccat ctctgtcaat gtttctatca acaactgcac caacaaggtc atcaaaaaaa
781 tcaagatttc agttgaccag atcacagatg ttgtcctgta ttcactagac aagtacacca
841 agactgtgtt cattcaggaa ttcacggaga ctgtagctgc taattccagc ttctcccaga
901 gctttgcagt aaccccaatc ctggctgcca gctgccagaa acggggcctg gcactggatg
961 gcaaacttaa gcatgaagat accaacctgg cctctagcac aattattaga ccgggaatgg
1021 acaaagagct gctggggatc ctggtgtcct acaaagtcag agtcaacctg atggtgtcct
1081 gtggtggcat cctaggagac ctgacagcca gcgatgttgg tgtggagcta cccttggtcc
1141 tgatccatcc gaagccatct catgaggccg ctaggtaatg gaatacaaga ttgggaagcc
1201 ccattcccct cttcccattt ccaccctcca tgttatgacg atagaaatgt gaaaatgctt
1261 ccttggggtg ctttcaatac atgtgcagtg gaaacataaa aaaaaaaaaa aaaaaa
//