LOCUS BC011720 2893 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens guanine nucleotide binding protein-like 3 (nucleolar)-like, mRNA (cDNA clone MGC:19514 IMAGE:4040098), complete cds. ACCESSION BC011720 VERSION BC011720.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2893) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2893) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC011720.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: l Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34222193 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..2893 /db_xref="H-InvDB:HIT000035400" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19514 IMAGE:4040098" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_18" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2893 /gene="GNL3L" /gene_synonym="RP11-353K22.1" /db_xref="GeneID:54552" /db_xref="HGNC:HGNC:25553" CDS 159..1907 /gene="GNL3L" /gene_synonym="RP11-353K22.1" /codon_start=1 /product="GNL3L protein" /protein_id="AAH11720.1" /db_xref="GeneID:54552" /db_xref="HGNC:HGNC:25553" /translation="MMKLRHKNKKPGEGSKGHKKISWPYPQPAKQNGKKATSKVPSAP HFVHPNDHANREAELKKKWVEEMREKQQAAREQERQKRRTIESYCQDVLRRQEEFEHK EEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVL RAQGNKKLVLVLNKIDLVPKEVVEKWLDYLRNELPTVAFKASTQHQVKNLNRCSVPVD QASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSLKRSR ACSVGAVPGITKFMQEVYLDKFIRLLDAPGIVPGPNSEVGTILRNCVHVQKLADPVTP VETILQRCNLEEISNYYGVSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADW VSGKISFYIPPPATHTLPTHLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELL GDTDPLEMEIKLLHSPMTKIADAIENKTTVYKIGDLTGYCTNPNRHQMGWAKRNVDHR PKSNSMVDVCSVDRRSVLQRIMETDPLQQGQALASALKNKKKMQKRADKIASKLSDSM MSALDLSGNADDGVGD" BASE COUNT 763 a 698 c 747 g 685 t ORIGIN 1 aagaaacttc tctcctcttt tctcacaatg tgcgctcacc tagacggccg ggcagttagg 61 atcgtctatt ggatgtgaaa ccagagatgc ccgccaacct ggaatagaga ggaagagagc 121 aagcagattt gaacctatct gctttcaagc tggtcatcat gatgaaactt agacacaaaa 181 ataaaaagcc aggtgaaggt tccaagggcc acaagaagat aagttggccc taccctcagc 241 ctgcaaagca aaatgggaag aaagcaacct ccaaagtgcc ctctgcacct cattttgttc 301 accccaatga tcatgccaat cgagaggctg aattaaagaa gaagtgggtt gaggagatga 361 gggagaagca gcaagccgcc cgggagcaag aaagacaaaa acgcaggacc attgagagct 421 actgtcagga tgtcctaaga cgccaggagg agtttgagca taaggaggaa gttttgcagg 481 aattaaatat gtttcctcag ctggatgacg aggccacgag gaaggcttat tacaaggagt 541 tccgtaaggt ggtggaatac tctgatgtga ttctggaagt cctggatgcc agagacccat 601 taggctgccg ctgcttccaa atggaggagg ctgtcctgcg agcacaaggc aacaagaagc 661 tggtcctggt cttgaacaag attgacctgg tccccaagga ggttgtggag aaatggctgg 721 attaccttcg gaatgagttg ccaaccgtgg ctttcaaggc cagtacccag catcaggtca 781 aaaacctgaa tcgttgcagt gtgccagtag atcaggcctc tgagtcactg ctgaaaagca 841 aagcctgctt tggagctgaa aacctcatga gggttctggg gaactattgc cgccttggtg 901 aagtgcgcac ccacattcgt gtgggtgttg tgggtcttcc caatgttggg aagagcagcc 961 tgatcaatag cctgaagcgc agccgcgcat gcagcgtggg agctgttcct ggaattacca 1021 aattcatgca ggaggtctac ctggacaagt tcatccggct cttggatgct ccaggcattg 1081 tcccagggcc caactcagag gtgggcacca tcctgcgtaa ctgcgtccac gtgcagaagc 1141 tggcagaccc tgtgacccca gtggagacca tcctgcagcg ctgcaacctg gaggagattt 1201 ccaactatta tggcgtctct gggttccaga ccactgagca ctttctgacg gcagtggccc 1261 accgtttggg gaagaagaag aagggaggct tatatagtca ggaacaggcg gccaaagctg 1321 tcctagctga ctgggtgagc gggaagatca gcttctatat accaccacca gccactcaca 1381 ctctgcccac ccatctcagt gctgagatcg ttaaggaaat gaccgaggtc tttgacatcg 1441 aggatactga gcaggccaat gaagacacca tggaatgctt ggccaccgga gaatctgatg 1501 agctgttggg tgacacggac ccacttgaaa tggagatcaa gttgctccat tctccgatga 1561 cgaaaatagc agatgccatt gaaaataaaa ccaccgtgta taagattgga gatctcactg 1621 ggtattgcac caatccgaac cgtcatcaga tggggtgggc taaacgcaat gtggaccacc 1681 gccctaagag caacagtatg gtggatgtct gctcagtgga ccgccgctca gtgctgcaga 1741 ggatcatgga gacggacccc ctgcaacagg gccaggctct ggcatctgcc ctgaaaaata 1801 agaagaagat gcagaaacgt gcagataaaa tcgccagcaa gctgtctgat tccatgatgt 1861 ctgctctcga cctctctggc aatgctgatg atggtgttgg tgactaatcg actgatctca 1921 cttcccttcc gctccaagca ccagttccgg tggtacgggg gaataccagt gaaatagttt 1981 ggttctccct gaagcatctg catattgaaa gaacgctttc cccactgtgt gtcttctccc 2041 cctcctcggg tgatccgctc gcttcggcct cccggggtgc tgggattata ggcgtgagcc 2101 actgtgccca gcctcacagc tgcatcttaa ccttaccttt gcctctgcct ctcaagctgg 2161 tacctcctaa tttacatcct aagagtggaa ccatgtgaca aggactggag tgccattggc 2221 tgtggactgt tcaggcaggg aagtacgaga ccactcttgt attcaggggc aaccaaagga 2281 gagaattacg tacttgttga gtacaaactg caccaagccc tggagaccca ttaccaccgt 2341 taaccctcaa tacagctctg ctagtaaggg attcgtctcc ccaaatgaaa aaaaaaagta 2401 atctcagaat gttggccggg catggtggct cacacctgtg gtctcagcct cccgagtagc 2461 tgggattatg ggcgcccgcc accacgccca gctaattttt gtatttttgg tagagatggg 2521 gtttcactgt tttggccagg ctggtctcga actcctgacc tcatgatcct cctgcctcgg 2581 cctcccaaag tgctgggatt ataggcatga accaccgtgt ccggccatat attttcgtct 2641 tttgaagact gttatataca tgaaattata tggtatgtag cattttgaga gcgacttctt 2701 ttgctatgag taatacattt gagattcatc catatttctc agtatattaa tagttcttat 2761 ttctgagtca ctccattgtg tggatttact actgtttgtt ccccagttga aggatgttta 2821 ggatctttgc agttttggac aattacaagt aaagctgcta taaacatttg tatgcaaaaa 2881 aaaaaaaaaa aaa //