LOCUS BC011720 2893 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens guanine nucleotide binding protein-like 3
(nucleolar)-like, mRNA (cDNA clone MGC:19514 IMAGE:4040098),
complete cds.
ACCESSION BC011720
VERSION BC011720.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2893)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2893)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC011720.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 27 Row: l Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222193
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2893
/db_xref="H-InvDB:HIT000035400"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19514 IMAGE:4040098"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2893
/gene="GNL3L"
/gene_synonym="RP11-353K22.1"
/db_xref="GeneID:54552"
/db_xref="HGNC:HGNC:25553"
CDS 159..1907
/gene="GNL3L"
/gene_synonym="RP11-353K22.1"
/codon_start=1
/product="GNL3L protein"
/protein_id="AAH11720.1"
/db_xref="GeneID:54552"
/db_xref="HGNC:HGNC:25553"
/translation="MMKLRHKNKKPGEGSKGHKKISWPYPQPAKQNGKKATSKVPSAP
HFVHPNDHANREAELKKKWVEEMREKQQAAREQERQKRRTIESYCQDVLRRQEEFEHK
EEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVL
RAQGNKKLVLVLNKIDLVPKEVVEKWLDYLRNELPTVAFKASTQHQVKNLNRCSVPVD
QASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRVGVVGLPNVGKSSLINSLKRSR
ACSVGAVPGITKFMQEVYLDKFIRLLDAPGIVPGPNSEVGTILRNCVHVQKLADPVTP
VETILQRCNLEEISNYYGVSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADW
VSGKISFYIPPPATHTLPTHLSAEIVKEMTEVFDIEDTEQANEDTMECLATGESDELL
GDTDPLEMEIKLLHSPMTKIADAIENKTTVYKIGDLTGYCTNPNRHQMGWAKRNVDHR
PKSNSMVDVCSVDRRSVLQRIMETDPLQQGQALASALKNKKKMQKRADKIASKLSDSM
MSALDLSGNADDGVGD"
BASE COUNT 763 a 698 c 747 g 685 t
ORIGIN
1 aagaaacttc tctcctcttt tctcacaatg tgcgctcacc tagacggccg ggcagttagg
61 atcgtctatt ggatgtgaaa ccagagatgc ccgccaacct ggaatagaga ggaagagagc
121 aagcagattt gaacctatct gctttcaagc tggtcatcat gatgaaactt agacacaaaa
181 ataaaaagcc aggtgaaggt tccaagggcc acaagaagat aagttggccc taccctcagc
241 ctgcaaagca aaatgggaag aaagcaacct ccaaagtgcc ctctgcacct cattttgttc
301 accccaatga tcatgccaat cgagaggctg aattaaagaa gaagtgggtt gaggagatga
361 gggagaagca gcaagccgcc cgggagcaag aaagacaaaa acgcaggacc attgagagct
421 actgtcagga tgtcctaaga cgccaggagg agtttgagca taaggaggaa gttttgcagg
481 aattaaatat gtttcctcag ctggatgacg aggccacgag gaaggcttat tacaaggagt
541 tccgtaaggt ggtggaatac tctgatgtga ttctggaagt cctggatgcc agagacccat
601 taggctgccg ctgcttccaa atggaggagg ctgtcctgcg agcacaaggc aacaagaagc
661 tggtcctggt cttgaacaag attgacctgg tccccaagga ggttgtggag aaatggctgg
721 attaccttcg gaatgagttg ccaaccgtgg ctttcaaggc cagtacccag catcaggtca
781 aaaacctgaa tcgttgcagt gtgccagtag atcaggcctc tgagtcactg ctgaaaagca
841 aagcctgctt tggagctgaa aacctcatga gggttctggg gaactattgc cgccttggtg
901 aagtgcgcac ccacattcgt gtgggtgttg tgggtcttcc caatgttggg aagagcagcc
961 tgatcaatag cctgaagcgc agccgcgcat gcagcgtggg agctgttcct ggaattacca
1021 aattcatgca ggaggtctac ctggacaagt tcatccggct cttggatgct ccaggcattg
1081 tcccagggcc caactcagag gtgggcacca tcctgcgtaa ctgcgtccac gtgcagaagc
1141 tggcagaccc tgtgacccca gtggagacca tcctgcagcg ctgcaacctg gaggagattt
1201 ccaactatta tggcgtctct gggttccaga ccactgagca ctttctgacg gcagtggccc
1261 accgtttggg gaagaagaag aagggaggct tatatagtca ggaacaggcg gccaaagctg
1321 tcctagctga ctgggtgagc gggaagatca gcttctatat accaccacca gccactcaca
1381 ctctgcccac ccatctcagt gctgagatcg ttaaggaaat gaccgaggtc tttgacatcg
1441 aggatactga gcaggccaat gaagacacca tggaatgctt ggccaccgga gaatctgatg
1501 agctgttggg tgacacggac ccacttgaaa tggagatcaa gttgctccat tctccgatga
1561 cgaaaatagc agatgccatt gaaaataaaa ccaccgtgta taagattgga gatctcactg
1621 ggtattgcac caatccgaac cgtcatcaga tggggtgggc taaacgcaat gtggaccacc
1681 gccctaagag caacagtatg gtggatgtct gctcagtgga ccgccgctca gtgctgcaga
1741 ggatcatgga gacggacccc ctgcaacagg gccaggctct ggcatctgcc ctgaaaaata
1801 agaagaagat gcagaaacgt gcagataaaa tcgccagcaa gctgtctgat tccatgatgt
1861 ctgctctcga cctctctggc aatgctgatg atggtgttgg tgactaatcg actgatctca
1921 cttcccttcc gctccaagca ccagttccgg tggtacgggg gaataccagt gaaatagttt
1981 ggttctccct gaagcatctg catattgaaa gaacgctttc cccactgtgt gtcttctccc
2041 cctcctcggg tgatccgctc gcttcggcct cccggggtgc tgggattata ggcgtgagcc
2101 actgtgccca gcctcacagc tgcatcttaa ccttaccttt gcctctgcct ctcaagctgg
2161 tacctcctaa tttacatcct aagagtggaa ccatgtgaca aggactggag tgccattggc
2221 tgtggactgt tcaggcaggg aagtacgaga ccactcttgt attcaggggc aaccaaagga
2281 gagaattacg tacttgttga gtacaaactg caccaagccc tggagaccca ttaccaccgt
2341 taaccctcaa tacagctctg ctagtaaggg attcgtctcc ccaaatgaaa aaaaaaagta
2401 atctcagaat gttggccggg catggtggct cacacctgtg gtctcagcct cccgagtagc
2461 tgggattatg ggcgcccgcc accacgccca gctaattttt gtatttttgg tagagatggg
2521 gtttcactgt tttggccagg ctggtctcga actcctgacc tcatgatcct cctgcctcgg
2581 cctcccaaag tgctgggatt ataggcatga accaccgtgt ccggccatat attttcgtct
2641 tttgaagact gttatataca tgaaattata tggtatgtag cattttgaga gcgacttctt
2701 ttgctatgag taatacattt gagattcatc catatttctc agtatattaa tagttcttat
2761 ttctgagtca ctccattgtg tggatttact actgtttgtt ccccagttga aggatgttta
2821 ggatctttgc agttttggac aattacaagt aaagctgcta taaacatttg tatgcaaaaa
2881 aaaaaaaaaa aaa
//