LOCUS BC011694 1589 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens H2A histone family, member X, mRNA (cDNA clone MGC:19656 IMAGE:3139343), complete cds. ACCESSION BC011694 VERSION BC011694.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1589) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1589) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC011694.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 27 Row: b Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1589 /db_xref="H-InvDB:HIT000035379" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19656 IMAGE:3139343" /tissue_type="Placenta, choriocarcinoma" /clone_lib="NIH_MGC_21" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1589 /gene="H2AFX" /gene_synonym="H2A.X" /gene_synonym="H2A/X" /db_xref="GeneID:3014" /db_xref="HGNC:HGNC:4739" /db_xref="MIM:601772" CDS 54..485 /gene="H2AFX" /gene_synonym="H2A.X" /gene_synonym="H2A/X" /codon_start=1 /product="H2A histone family, member X" /protein_id="AAH11694.1" /db_xref="GeneID:3014" /db_xref="HGNC:HGNC:4739" /db_xref="MIM:601772" /translation="MSGRGKTGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGHYAERV GAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVT IAQGGVLPNIQAVLLPKKTSATVGPKAPSGGKKATQASQEY" BASE COUNT 265 a 555 c 497 g 272 t ORIGIN 1 ggcgtctgtt ctagtgtttg agccgtcgtg cttcaccggt ctacctcgct agcatgtcgg 61 gccgcggcaa gactggcggc aaggcccgcg ccaaggccaa gtcgcgctcg tcgcgcgccg 121 gcctccagtt cccagtgggc cgtgtacacc ggctgctgcg gaagggccac tacgccgagc 181 gcgttggcgc cggcgcgcca gtgtacctgg cggcagtgct ggagtacctc accgctgaga 241 tcctggagct ggcgggcaat gcggcccgcg acaacaagaa gacgcgaatc atcccccgcc 301 acctgcagct ggccatccgc aacgacgagg agctcaacaa gctgctgggc ggcgtgacga 361 tcgcccaggg aggcgtcctg cccaacatcc aggccgtgct gctgcccaag aagaccagcg 421 ccaccgtggg gccgaaggcg ccctcgggcg gcaagaaggc cacccaggcc tcccaggagt 481 actaagaggg cccgcgccgc ggccggccgc caggcctccc catgccacca caaaggccct 541 tttaagggcc accaccgccc tcatggaaag agctgagccg cttcagactg cggggcaagc 601 gggccgcggc tcccttcccc tcccctcccc tcgcccgcct tcgccgcccg gcctcgagtc 661 cccgcccgcc cccgctcccg tcccgcaccg cctgccgcgt cggcctcggg ccctgccctg 721 tccgccgtcc gccctccggt agggttcggg ccttccggat gcggcttggg cgctcttcgg 781 ggacctccgt ggcgcggaag acccgagcct gccgggggga ggccggcggc gccgcacctg 841 cccgcctcgg cgttcgtgac tcagccgccc catcccgagt cgctaagggg ctgcggggag 901 gccgcagcac cttctggaag acttggcctt ccgctctgac gcagggccga ggtgggcagt 961 ccaggccgag aggccggcgg ccctgaaggt gagtgaggcc ctcggcagct gcagccgggg 1021 tgtctggtac ccccccggcg tggtgcttag cccaggactt tcagacgcgg ccgctggccg 1081 gaaggctttg gtgggagaga cgcgatcgcc gatttcggtc tggcgcccct tctgcggccg 1141 ggacccaggc ctttcacatc agctctccct ccatcttcat tcataggtct gcgctggggc 1201 cgggacgaag cacttggtaa caggcacatc ttcctcccga gtgactgcct cctaggagga 1261 catttagggg agggcagagg cctgcagttt ggcttcacgg ctggctatgt ggacagcaag 1321 agtcgttttc gcggaagccg actggcagcc aggcctgtcg ggccccccga cgccgcccca 1381 tttcccttcc agcaaactca actcggcaat ccaagcacct agataccagc acaagtcggt 1441 taatccctgt ctggactgag cctccgttgg cttctgaact ggaattctgc agctaaccct 1501 tccacgacta gaaccttagg cattggggag ttttagatgg actaatttta ttaaaggatt 1561 gttttttttt taaaaaaaaa aaaaaaaaa //