LOCUS BC011460 1449 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chitinase 3-like 2, mRNA (cDNA clone MGC:17183 IMAGE:4214121), complete cds. ACCESSION BC011460 VERSION BC011460.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1449) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1449) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (30-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: n Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68533254. FEATURES Location/Qualifiers source 1..1449 /db_xref="H-InvDB:HIT000035257" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17183 IMAGE:4214121" /tissue_type="Brain, glioblastoma with EGFR amplification" /clone_lib="NCI_CGAP_Brn64" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1449 /gene="CHI3L2" /gene_synonym="YKL-39" /gene_synonym="YKL39" /db_xref="GeneID:1117" /db_xref="HGNC:HGNC:1933" /db_xref="MIM:601526" CDS 10..1182 /gene="CHI3L2" /gene_synonym="YKL-39" /gene_synonym="YKL39" /codon_start=1 /product="chitinase 3-like 2" /protein_id="AAH11460.1" /db_xref="GeneID:1117" /db_xref="HGNC:HGNC:1933" /db_xref="MIM:601526" /translation="MGATTMDQKSLWAGVVVLLLLQGGSAYKLVCYFTNWSQDRQEPG KFTPENIDPFLCSHLIYSFASIENNKVIIKDKSEVMLYQTINSLKTKNPKLKILLSIG GYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLDVSWIYPDQKENTHFTVLIH ELAEAFQKDFTKSTKERLLLTVGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSW EKPLITGHNSPLSKGWQDRGPSSYYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLA SAETTVGAPASGPGAAGPITESSGFLAYYEICQFLKGAKITRLQDQQVPYAVKGNQWV GYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDFTGKSCNQGPYPLVQAVKRSLGSL" BASE COUNT 407 a 356 c 334 g 352 t ORIGIN 1 gccaaggata tgggagcaac caccatggac cagaagtctc tctgggcagg tgtagtggtc 61 ttgctgcttc tccagggagg atctgcctac aaactggttt gctactttac caactggtcc 121 caggaccggc aggaaccagg aaaattcacc cctgagaata ttgacccctt cctatgctct 181 catctcatct attcattcgc cagcatcgaa aacaacaagg ttatcatcaa ggacaagagt 241 gaagtgatgc tctaccagac catcaacagt ctcaaaacca agaatcccaa actgaaaatt 301 ctcttgtcca ttggagggta cctgtttggt tccaaagggt tccaccctat ggtggattct 361 tctacatcac gcttggaatt cattaactcc ataatcctgt ttctgaggaa ccataacttt 421 gatggactgg atgtaagctg gatctaccca gatcagaaag aaaacactca tttcactgtg 481 ctgattcatg agttagcaga agcctttcag aaggacttca caaaatccac caaggaaagg 541 cttctcttga ctgtgggcgt atctgcaggg aggcaaatga ttgataacag ctatcaagtt 601 gagaaactgg caaaagatct ggatttcatc aacctcctgt cctttgactt ccatgggtct 661 tgggaaaagc cccttatcac tggccacaac agccctctga gcaaggggtg gcaggacaga 721 gggccaagct cctactacaa tgtggaatat gctgtggggt actggataca taagggaatg 781 ccatcagaga aggtggtcat gggcatcccc acatatgggc actccttcac actggcctct 841 gcagaaacca ccgtgggggc ccctgcctct ggccctggag ctgctggacc catcacagag 901 tcttcaggct tcctggccta ttatgagatc tgccagttcc tgaaaggagc caagatcacg 961 cggctccagg atcagcaggt tccctacgca gtcaagggga accagtgggt gggctatgat 1021 gatgtgaaga gtatggagac caaggttcag ttcttaaaga atttaaacct gggaggagcc 1081 atgatctggt ctattgacat ggatgacttc actggcaaat cctgcaacca gggcccttac 1141 cctcttgtcc aagcagtcaa gagaagcctt ggctccctgt gaaggattaa cttacagaga 1201 agcaggcaag atgaccttgc tgcctggggc ctgctctctc ccaggaattc tcatgtggga 1261 ttccccttgc caggccggcc tttggatctc tcttccaagc ctttcctgac ttcctcttag 1321 atcatagatt ggacctggtt ttgttttcct gcagctgttg acttgttgcc ctgaagtaca 1381 ataaaaaaaa ttcattttgc tccagtaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1441 aaaaaaaaa //