LOCUS BC010701 2641 bp mRNA linear HUM 28-JUL-2005 DEFINITION Homo sapiens sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B, mRNA (cDNA clone IMAGE:3855397), partial cds. ACCESSION BC010701 VERSION BC010701.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2641) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2641) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 13 Row: c Column: 23. FEATURES Location/Qualifiers source 1..2641 /db_xref="H-InvDB:HIT000035052" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3855397" /tissue_type="Colon, adenocarcinoma" /clone_lib="NIH_MGC_65" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..2641 /gene="SEMA4B" /gene_synonym="KIAA1745" /gene_synonym="SemC" /db_xref="GeneID:10509" CDS <1..1595 /gene="SEMA4B" /gene_synonym="KIAA1745" /gene_synonym="SemC" /codon_start=3 /product="SEMA4B protein" /protein_id="AAH10701.2" /db_xref="GeneID:10509" /translation="LLCSRPDDGFPFNVLQDVFTLSPSPQDWRDTLFYGVFTSQWHRG TTEGSAVCVFTMKDVQRVFSGLYKEVNRETQQWYTVTHPVPTPRPGACITNSARERKI NSSLQLPDRVLNFLKDHFLMDGQVRSRMLLLQPQARYQRVAVHRVPGLHHTYDVLFLG TGDGRLHKAVSVGPRVHIIEELQIFSSGQPVQNLLLDTHRGLLYAASHSGVVQVPMAN CSLYRSCGDCLLARDPYCAWSGSSCKHVSLYQPQLATRPWIQDIKGASAKDLCSASSV VSPSFVPTGEKPCEQVQFQPNTVNTLACPLLSNLATRLWLRNGAPVNASASCHVLPTG DLLLVGTQQLGEFQCWSLEEGFQQLVASYCPEVVEDGVADQTDEGGSVPVIISTSRVS APAGGKASWGADRSYWKEFLVMCTLFVLAVLLPVLFLLYRHRNSMKVFLKQGECASVH PKTCPVVLPPETRPLNGLGPPSTPLDHRGYQSLSDSPPGARVFTESEKRPLSIQDSFV EVSPVCPRPRVRLGSEIRDSVV" BASE COUNT 541 a 841 c 722 g 537 t ORIGIN 1 agctgctgtg ctcacggccc gacgatggct tccccttcaa cgtgctgcag gatgtcttca 61 cgctgagccc cagcccccag gactggcgtg acaccctttt ctatggggtc ttcacttccc 121 agtggcacag gggaactaca gaaggctctg ccgtctgtgt cttcacaatg aaggatgtgc 181 agagagtctt cagcggcctc tacaaggagg tgaaccgtga gacacagcag tggtacaccg 241 tgacccaccc ggtgcccaca ccccggcctg gagcgtgcat caccaacagt gcccgggaaa 301 ggaagatcaa ctcatccctg cagctcccag accgcgtgct gaactttctc aaggaccact 361 tcctgatgga cgggcaggtc cgaagccgca tgctgctgct gcagccccag gctcgctacc 421 agcgcgtggc tgtacaccgc gtccctggcc tgcaccacac ctacgatgtc ctcttcctcg 481 gcactggtga cggccggctc cacaaggcag tgagcgtggg cccccgggtg cacatcattg 541 aggagctgca gatcttctca tcgggacagc ccgtgcagaa tctgctcctg gacacccaca 601 gggggctgct gtatgcggcc tcacactcgg gcgtagtcca ggtgcccatg gccaactgca 661 gcctgtaccg gagctgtggg gactgcctcc tcgcccggga cccctactgt gcttggagcg 721 gctccagctg caagcacgtc agcctctacc agcctcagct ggccaccagg ccgtggatcc 781 aggacatcaa gggagccagc gccaaggacc tttgcagcgc gtcttcggtt gtgtccccgt 841 cttttgtacc aacaggggag aagccatgtg agcaagtcca gttccagccc aacacagtga 901 acactttggc ctgcccgctc ctctccaacc tggcgacccg actctggcta cgcaacgggg 961 cccccgtcaa tgcctcggcc tcctgccacg tgctacccac tggggacctg ctgctggtgg 1021 gcacccaaca gctgggggag ttccagtgct ggtcactaga ggagggcttc cagcagctgg 1081 tagccagcta ctgcccagag gtggtggagg acggggtggc agaccaaaca gatgagggtg 1141 gcagtgtacc cgtcattatc agcacatcgc gtgtgagtgc accagctggt ggcaaggcca 1201 gctggggtgc agacaggtcc tactggaagg agttcctggt gatgtgcacg ctctttgtgc 1261 tggccgtgct gctcccagtt ttattcttgc tctaccggca ccggaacagc atgaaagtct 1321 tcctgaagca gggggaatgt gccagcgtgc accccaagac ctgccctgtg gtgctgcccc 1381 ctgagacccg cccactcaac ggcctagggc cccctagcac cccactcgat caccgagggt 1441 accagtccct gtcagacagc cccccggggg cccgagtctt cactgagtca gagaagaggc 1501 cactcagcat ccaagacagc ttcgtggagg tatccccagt gtgcccccgg ccccgggtcc 1561 gccttggctc ggagatccgt gactctgtgg tgtgagagct gacttccaga ggacgctgcc 1621 ctggcttcag gggctgtgaa tgctcggaga gggtcaactg gacctcccct ccgctctgct 1681 cttcgtggaa cacgaccgtg gtgcccggcc cttgggagcc ttggagccag ctggcctgct 1741 gctctccagt caagtagcga agctcctacc acccagacac ccaaacagcc gtggccccag 1801 aggtcctggc caaatatggg ggcctgccta ggttggtgga acagtgctcc ttatgtaaac 1861 tgagcccttt gtttagaaaa caattccaaa tgtgaaacta gaatgagagg gaagagatag 1921 catggcatgc agcacacacg gctgctccag ttcatggcct cccaggggtg ctggggatgc 1981 atccaaagtg gttgtctgag acagagttgg aaaccctcac caactggcct cttcaccttc 2041 cacattatcc cgctgccacc ggctgccctg tctcactgca gattcaggac cagcttgggc 2101 tgcgtgcgtt ctgccttgcc agtcagccga ggatgtagtt gttgctgccg tcgtcccacc 2161 acctcaggga ccagagggct aggttggcac tgcggccctc accaggtcct gggctcggac 2221 ccaactcctg gacctttcca gcctgtatca ggctgtggcc acacgagagg acagcgcgag 2281 ctcaggagag atttcgtgac aatgtacgcc tttccctcag aattcaggga agagactgtc 2341 gcctgccttc ctccgttgtt gcgtgagaac ccgtgtgccc cttcccacca tatccaccct 2401 cgctccatct ttgaactcaa acacgaggaa ctaactgcac cctggtcctc tccccagtcc 2461 ccagttcacc ctccatccct caccttcctc cactctaagg gatatcaaca ctgcccagca 2521 caggggccct gaatttatgt ggtttttata tattttttaa taagatgcac tttatgtcat 2581 tttttaataa agtctgaaga attactgttt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2641 a //