LOCUS       BC010570                1583 bp    mRNA    linear   HUM 07-AUG-2008
DEFINITION  Homo sapiens 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase,
            mRNA (cDNA clone MGC:17215 IMAGE:4178704), complete cds.
ACCESSION   BC010570
VERSION     BC010570.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1583)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-JUL-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 12 Row: i Column: 3.
FEATURES             Location/Qualifiers
     source          1..1583
                     /db_xref="H-InvDB:HIT000035002"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:17215 IMAGE:4178704"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1583
                     /gene="HMGCL"
                     /gene_synonym="HL"
                     /db_xref="GeneID:3155"
                     /db_xref="HGNC:HGNC:5005"
                     /db_xref="MIM:246450"
     CDS             11..988
                     /gene="HMGCL"
                     /gene_synonym="HL"
                     /codon_start=1
                     /product="3-hydroxymethyl-3-methylglutaryl-Coenzyme A
                     lyase"
                     /protein_id="AAH10570.1"
                     /db_xref="GeneID:3155"
                     /db_xref="HGNC:HGNC:5005"
                     /db_xref="MIM:246450"
                     /translation="MAAMRKALPRRLVGLASLRAVSTSSMGTLPKRVKIVEVGPRDGL
                     QNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGIN
                     YPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSA
                     NISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDML
                     SAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNL
                     ATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL"
BASE COUNT          393 a          396 c          438 g          356 t
ORIGIN      
        1 ctgggccaag atggcagcaa tgaggaaggc gcttccgcgg cgactggtgg gcttggcgtc
       61 cctccgggct gtcagcacct catctatggg cactttacca aagcgggtga aaattgtgga
      121 agttggtccc cgagatggac tacaaaatga aaagaatatc gtatctactc cagtgaaaat
      181 caagctgata gacatgcttt ctgaagcagg actctctgtt atagaaacca ccagctttgt
      241 gtctcctaag tgggttcccc agatgggtga ccacactgaa gtcttgaagg gcattcagaa
      301 gtttcctggc atcaactacc cagtcctgac cccaaatttg aaaggcttcg aggcagcggt
      361 tgctgctgga gccaaggaag tagtcatctt tggagctgcc tcagagctct tcaccaagaa
      421 gaacatcaat tgttccatag aggagagttt tcagaggttt gacgcaatcc tgaaggcagc
      481 gcagtcagcc aatatttctg tgcgggggta cgtctcctgt gctcttggct gcccttatga
      541 agggaagatc tccccagcta aagtagctga ggtcaccaag aagttctact caatgggctg
      601 ctacgagatc tccctggggg acaccattgg tgtgggcacc ccagggatca tgaaagacat
      661 gctgtctgct gtcatgcagg aagtgcctct ggctgccctg gctgtccact gccatgacac
      721 ctatggtcaa gccctggcca acaccttgat ggccctgcag atgggagtga gtgtcgtgga
      781 ctcttctgtg gcaggacttg gaggctgtcc ctacgcacag ggggcatcag gaaacttggc
      841 cacagaagac ctggtctaca tgctagaggg cttgggcatt cacacgggtg tgaatctcca
      901 gaagcttctg gaagctggaa actttatctg tcaagccctg aacagaaaaa ctagctccaa
      961 agtggctcag gctacctgta aactctgagc cccttgccca cctgaagccc tggggatgat
     1021 gtggaaatag gggcacacac agatgattca tggatgggga catggaaatg agaataggtt
     1081 aaatggtgca ggtacctcat agccagctct acacagaggt ctctcctggc agaaagcagg
     1141 cgaagggcag gaggagctgc ttggcagaag gacctcctgc ccagacctga ggagtgagag
     1201 gctttgaggg ctgaagtctc cctttgttac ggaccctggc ccaggagttg aatgcctgag
     1261 gacgtgtggg aaccccgttc cctacttagc atgatccttg agtctcctct ctggatggaa
     1321 tccgcgagct ggccacctgg ccaccctcta cacggctcca ccctgccatg gccgtggggc
     1381 ccttgctctc tgacttctca ggacacaggt catggaggtt cttcccaagc tggcagaggc
     1441 catttgtgga aagtggagag ctacgtggtg gccatctgcc aactccagca tctctggaaa
     1501 atctccacgc tgaatgtgat ttttgaaaac agcttatgta attaaaggtt gaatggcaca
     1561 tcataaaaaa aaaaaaaaaa aaa
//