LOCUS BC010570 1583 bp mRNA linear HUM 07-AUG-2008 DEFINITION Homo sapiens 3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase, mRNA (cDNA clone MGC:17215 IMAGE:4178704), complete cds. ACCESSION BC010570 VERSION BC010570.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1583) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1583) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 12 Row: i Column: 3. FEATURES Location/Qualifiers source 1..1583 /db_xref="H-InvDB:HIT000035002" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17215 IMAGE:4178704" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1583 /gene="HMGCL" /gene_synonym="HL" /db_xref="GeneID:3155" /db_xref="HGNC:HGNC:5005" /db_xref="MIM:246450" CDS 11..988 /gene="HMGCL" /gene_synonym="HL" /codon_start=1 /product="3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase" /protein_id="AAH10570.1" /db_xref="GeneID:3155" /db_xref="HGNC:HGNC:5005" /db_xref="MIM:246450" /translation="MAAMRKALPRRLVGLASLRAVSTSSMGTLPKRVKIVEVGPRDGL QNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGIN YPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSA NISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDML SAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNL ATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL" BASE COUNT 393 a 396 c 438 g 356 t ORIGIN 1 ctgggccaag atggcagcaa tgaggaaggc gcttccgcgg cgactggtgg gcttggcgtc 61 cctccgggct gtcagcacct catctatggg cactttacca aagcgggtga aaattgtgga 121 agttggtccc cgagatggac tacaaaatga aaagaatatc gtatctactc cagtgaaaat 181 caagctgata gacatgcttt ctgaagcagg actctctgtt atagaaacca ccagctttgt 241 gtctcctaag tgggttcccc agatgggtga ccacactgaa gtcttgaagg gcattcagaa 301 gtttcctggc atcaactacc cagtcctgac cccaaatttg aaaggcttcg aggcagcggt 361 tgctgctgga gccaaggaag tagtcatctt tggagctgcc tcagagctct tcaccaagaa 421 gaacatcaat tgttccatag aggagagttt tcagaggttt gacgcaatcc tgaaggcagc 481 gcagtcagcc aatatttctg tgcgggggta cgtctcctgt gctcttggct gcccttatga 541 agggaagatc tccccagcta aagtagctga ggtcaccaag aagttctact caatgggctg 601 ctacgagatc tccctggggg acaccattgg tgtgggcacc ccagggatca tgaaagacat 661 gctgtctgct gtcatgcagg aagtgcctct ggctgccctg gctgtccact gccatgacac 721 ctatggtcaa gccctggcca acaccttgat ggccctgcag atgggagtga gtgtcgtgga 781 ctcttctgtg gcaggacttg gaggctgtcc ctacgcacag ggggcatcag gaaacttggc 841 cacagaagac ctggtctaca tgctagaggg cttgggcatt cacacgggtg tgaatctcca 901 gaagcttctg gaagctggaa actttatctg tcaagccctg aacagaaaaa ctagctccaa 961 agtggctcag gctacctgta aactctgagc cccttgccca cctgaagccc tggggatgat 1021 gtggaaatag gggcacacac agatgattca tggatgggga catggaaatg agaataggtt 1081 aaatggtgca ggtacctcat agccagctct acacagaggt ctctcctggc agaaagcagg 1141 cgaagggcag gaggagctgc ttggcagaag gacctcctgc ccagacctga ggagtgagag 1201 gctttgaggg ctgaagtctc cctttgttac ggaccctggc ccaggagttg aatgcctgag 1261 gacgtgtggg aaccccgttc cctacttagc atgatccttg agtctcctct ctggatggaa 1321 tccgcgagct ggccacctgg ccaccctcta cacggctcca ccctgccatg gccgtggggc 1381 ccttgctctc tgacttctca ggacacaggt catggaggtt cttcccaagc tggcagaggc 1441 catttgtgga aagtggagag ctacgtggtg gccatctgcc aactccagca tctctggaaa 1501 atctccacgc tgaatgtgat ttttgaaaac agcttatgta attaaaggtt gaatggcaca 1561 tcataaaaaa aaaaaaaaaa aaa //