LOCUS BC009951 1417 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens collectin sub-family member 11, mRNA (cDNA clone MGC:14216 IMAGE:4125795), complete cds. ACCESSION BC009951 VERSION BC009951.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1417) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1417) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC009951.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 20 Row: f Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40548419. FEATURES Location/Qualifiers source 1..1417 /db_xref="H-InvDB:HIT000050523" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14216 IMAGE:4125795" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1417 /gene="COLEC11" /gene_synonym="MGC3279" /db_xref="GeneID:78989" /db_xref="HGNC:HGNC:17213" CDS 235..1041 /gene="COLEC11" /gene_synonym="MGC3279" /codon_start=1 /product="collectin sub-family member 11" /protein_id="AAH09951.1" /db_xref="GeneID:78989" /db_xref="HGNC:HGNC:17213" /translation="MTPALCRSSSLASKGMRERRETKAPPDGLEESAPREKKQSQPVV TASDISKRKCTSSFVEMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGP NGEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRY ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSP MRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM" BASE COUNT 349 a 369 c 433 g 266 t ORIGIN 1 cttctccctg cgcctgggac tgcggccgcc tctctaaata gcagccatga ggcgcctggg 61 ggcagtgtcc tcgcgggcca gcgacgggca ggacgccccg ttcgcctagc gcgtgctcag 121 gagttggtgt cctgcctgcg ctcaggatga gggggaatct ggccctggtg ggcgttctaa 181 tcagcctggc cttcctgtca ctgctgccat ctggacatcc tcagccggct ggcgatgacg 241 cctgctctgt gcagatcctc gtccctggcc tcaaagggga tgcgggagag aagggagaca 301 aaggcgcccc cggacggcct ggaagagtcg gccccacggg agaaaaagca gtcacagcca 361 gtcgtgacag cttctgacat ctccaaaagg aagtgcacct cgtcctttgt agaaatggga 421 tcacagggag acatggggga caaaggacag aaaggcagtg tgggtcgtca tggaaaaatt 481 ggtcccattg gctctaaagg tgagaaagga gattccggtg acataggacc ccctggtcct 541 aatggagaac caggcctccc atgtgagtgc agccagctgc gcaaggccat cggggagatg 601 gacaaccagg tctctcagct gaccagcgag ctcaagttca tcaagaatgc tgtcgccggt 661 gtgcgcgaga cggagagcaa gatctacctg ctggtgaagg aggagaagcg ctacgcggac 721 gcccagctgt cctgccaggg ccgcgggggc acgctgagca tgcccaagga cgaggctgcc 781 aatggcctga tggccgcata cctggcgcaa gccggcctgg cccgtgtctt catcggcatc 841 aacgacctgg agaaggaggg cgccttcgtg tactctgacc actcccccat gcggaccttc 901 aacaagtggc gcagcggtga gcccaacaat gcctacgacg aggaggactg cgtggagatg 961 gtggcctcgg gcggctggaa cgacgtggcc tgccacacca ccatgtactt catgtgtgag 1021 tttgacaagg agaacatgtg agcctcaggc tggggctgcc cattgggggc cccacatgtc 1081 cctgcagggt tggcagggac agagcccaga ccatggtgcc agccagggag ctgtccctct 1141 gtgaagggtg gaggctcact gagtagaggg ctgttgtcta aactgagaaa atggcctatg 1201 cttaagagga aaatgaaagt gttcctgggg tgctgtctct gaagaagcag agtttcatta 1261 cctgtattgt agccccaatg tcattatgta attattaccc agaattgctc ttccataaag 1321 cttgtgcctt tgtccaagct atacaataaa atctttaagt agtgcagtag ttaaaaaaaa 1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //