LOCUS BC009951 1417 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens collectin sub-family member 11, mRNA (cDNA clone
MGC:14216 IMAGE:4125795), complete cds.
ACCESSION BC009951
VERSION BC009951.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1417)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1417)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009951.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: f Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548419.
FEATURES Location/Qualifiers
source 1..1417
/db_xref="H-InvDB:HIT000050523"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14216 IMAGE:4125795"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1417
/gene="COLEC11"
/gene_synonym="MGC3279"
/db_xref="GeneID:78989"
/db_xref="HGNC:HGNC:17213"
CDS 235..1041
/gene="COLEC11"
/gene_synonym="MGC3279"
/codon_start=1
/product="collectin sub-family member 11"
/protein_id="AAH09951.1"
/db_xref="GeneID:78989"
/db_xref="HGNC:HGNC:17213"
/translation="MTPALCRSSSLASKGMRERRETKAPPDGLEESAPREKKQSQPVV
TASDISKRKCTSSFVEMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGP
NGEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRY
ADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSP
MRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM"
BASE COUNT 349 a 369 c 433 g 266 t
ORIGIN
1 cttctccctg cgcctgggac tgcggccgcc tctctaaata gcagccatga ggcgcctggg
61 ggcagtgtcc tcgcgggcca gcgacgggca ggacgccccg ttcgcctagc gcgtgctcag
121 gagttggtgt cctgcctgcg ctcaggatga gggggaatct ggccctggtg ggcgttctaa
181 tcagcctggc cttcctgtca ctgctgccat ctggacatcc tcagccggct ggcgatgacg
241 cctgctctgt gcagatcctc gtccctggcc tcaaagggga tgcgggagag aagggagaca
301 aaggcgcccc cggacggcct ggaagagtcg gccccacggg agaaaaagca gtcacagcca
361 gtcgtgacag cttctgacat ctccaaaagg aagtgcacct cgtcctttgt agaaatggga
421 tcacagggag acatggggga caaaggacag aaaggcagtg tgggtcgtca tggaaaaatt
481 ggtcccattg gctctaaagg tgagaaagga gattccggtg acataggacc ccctggtcct
541 aatggagaac caggcctccc atgtgagtgc agccagctgc gcaaggccat cggggagatg
601 gacaaccagg tctctcagct gaccagcgag ctcaagttca tcaagaatgc tgtcgccggt
661 gtgcgcgaga cggagagcaa gatctacctg ctggtgaagg aggagaagcg ctacgcggac
721 gcccagctgt cctgccaggg ccgcgggggc acgctgagca tgcccaagga cgaggctgcc
781 aatggcctga tggccgcata cctggcgcaa gccggcctgg cccgtgtctt catcggcatc
841 aacgacctgg agaaggaggg cgccttcgtg tactctgacc actcccccat gcggaccttc
901 aacaagtggc gcagcggtga gcccaacaat gcctacgacg aggaggactg cgtggagatg
961 gtggcctcgg gcggctggaa cgacgtggcc tgccacacca ccatgtactt catgtgtgag
1021 tttgacaagg agaacatgtg agcctcaggc tggggctgcc cattgggggc cccacatgtc
1081 cctgcagggt tggcagggac agagcccaga ccatggtgcc agccagggag ctgtccctct
1141 gtgaagggtg gaggctcact gagtagaggg ctgttgtcta aactgagaaa atggcctatg
1201 cttaagagga aaatgaaagt gttcctgggg tgctgtctct gaagaagcag agtttcatta
1261 cctgtattgt agccccaatg tcattatgta attattaccc agaattgctc ttccataaag
1321 cttgtgcctt tgtccaagct atacaataaa atctttaagt agtgcagtag ttaaaaaaaa
1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//