LOCUS BC009676 1733 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens histone deacetylase 11, mRNA (cDNA clone MGC:8894 IMAGE:3906049), complete cds. ACCESSION BC009676 VERSION BC009676.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1733) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1733) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 14 Row: p Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13376227. FEATURES Location/Qualifiers source 1..1733 /db_xref="H-InvDB:HIT000034496" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8894 IMAGE:3906049" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1733 /gene="HDAC11" /gene_synonym="FLJ22237" /db_xref="GeneID:79885" /db_xref="HGNC:HGNC:19086" /db_xref="MIM:607226" CDS 10..1053 /gene="HDAC11" /gene_synonym="FLJ22237" /codon_start=1 /product="histone deacetylase 11" /protein_id="AAH09676.1" /db_xref="GeneID:79885" /db_xref="HGNC:HGNC:19086" /db_xref="MIM:607226" /translation="MLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGK VINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLP NFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITL AIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQA IRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPA GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIGPESPSVSA QNSDTPLLPPAVP" BASE COUNT 364 a 481 c 541 g 347 t ORIGIN 1 ggccccggga tgctacacac aacccagctg taccagcatg tgccagagac acgctggcca 61 atcgtgtact cgccgcgcta caacatcacc ttcatgggcc tggagaagct gcatcccttt 121 gatgccggaa aatggggcaa agtgatcaat ttcctaaaag aagagaagct tctgtctgac 181 agcatgctgg tggaggcgcg ggaggcctcg gaggaggacc tgctggtggt gcacacgagg 241 cgctatctta atgagctcaa gtggtccttt gctgttgcta ccatcacaga aatccccccc 301 gttatcttcc tccccaactt ccttgtgcag aggaaggtgc tgaggcccct tcggacccag 361 acaggaggaa ccataatggc ggggaagctg gctgtggagc gaggctgggc catcaacgtg 421 gggggtggct tccaccactg ctccagcgac cgtggcgggg gcttctgtgc ctatgcggac 481 atcacgctcg ccatcaagtt tctgtttgag cgtgtggagg gcatctccag ggctaccatc 541 attgatcttg atgcccatca gggcaatggg catgagcgag acttcatgga cgacaagcgt 601 gtgtacatca tggatgtcta caaccgccac atctacccag gggaccgctt tgccaagcag 661 gccatcaggc ggaaggtgga gctggagtgg ggcacagagg atgatgagta cctggataag 721 gtggagagga acatcaagaa atccctccag gagcacctgc ccgacgtggt ggtatacaat 781 gcaggcaccg acatcctcga gggggaccgc cttggggggc tgtccatcag cccagcgggc 841 atcgtgaagc gggatgagct ggtgttccgg atggtccgtg gccgccgggt gcccatcctt 901 atggtgacct caggcgggta ccagaagcgc acagcccgca tcattgctga ctccatactt 961 aatctgtttg gcctggggct cattgggcct gagtcaccca gcgtctccgc acagaactca 1021 gacacaccgc tgcttccccc tgcagtgccc tgacccttgc tgccctgcct gtcacgtggc 1081 cctgcctatc cgccccttag tgctttttgt tttctaacct catggggtgg tggaggcagc 1141 cttcagtgag catggagggg cagggccatc cctggctggg gcctggagct ggcccttcct 1201 ctacttttcc ctgctggaag ccagaagggc ttgaggcctc tatgggtggg ggcagaaggc 1261 agagcctgtg tcccaggggg acccacacga agtcaccagc ccataggtcc agggaggcag 1321 gcagttaact gagaattgga gaggacaggc taggtcccag gcacagcgag ggccctgggc 1381 ttggggtgtt ctggttttga gaacggcaga cccaggtcgg agtgaggaag cttccacctc 1441 catcctgact aggcctgcat cctaactggg cctccctccc tccccttggt catgggattt 1501 gctgccctct ttgccccaga gctgaagagc tataggcact ggtgtggatg gcccaggagg 1561 tgctggagct aggtctccag gtgggcctgg ttcccaggca gcaggtggga accctgggcc 1621 tggatgtgag gggcggtcag gaaggggtac aggtgggttc cctcatctgg agttccccct 1681 caataaagca aggtctggac ctgcaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //