LOCUS BC009676 1733 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens histone deacetylase 11, mRNA (cDNA clone MGC:8894
IMAGE:3906049), complete cds.
ACCESSION BC009676
VERSION BC009676.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1733)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1733)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: p Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376227.
FEATURES Location/Qualifiers
source 1..1733
/db_xref="H-InvDB:HIT000034496"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8894 IMAGE:3906049"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1733
/gene="HDAC11"
/gene_synonym="FLJ22237"
/db_xref="GeneID:79885"
/db_xref="HGNC:HGNC:19086"
/db_xref="MIM:607226"
CDS 10..1053
/gene="HDAC11"
/gene_synonym="FLJ22237"
/codon_start=1
/product="histone deacetylase 11"
/protein_id="AAH09676.1"
/db_xref="GeneID:79885"
/db_xref="HGNC:HGNC:19086"
/db_xref="MIM:607226"
/translation="MLHTTQLYQHVPETRWPIVYSPRYNITFMGLEKLHPFDAGKWGK
VINFLKEEKLLSDSMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLP
NFLVQRKVLRPLRTQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITL
AIKFLFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQA
IRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPA
GIVKRDELVFRMVRGRRVPILMVTSGGYQKRTARIIADSILNLFGLGLIGPESPSVSA
QNSDTPLLPPAVP"
BASE COUNT 364 a 481 c 541 g 347 t
ORIGIN
1 ggccccggga tgctacacac aacccagctg taccagcatg tgccagagac acgctggcca
61 atcgtgtact cgccgcgcta caacatcacc ttcatgggcc tggagaagct gcatcccttt
121 gatgccggaa aatggggcaa agtgatcaat ttcctaaaag aagagaagct tctgtctgac
181 agcatgctgg tggaggcgcg ggaggcctcg gaggaggacc tgctggtggt gcacacgagg
241 cgctatctta atgagctcaa gtggtccttt gctgttgcta ccatcacaga aatccccccc
301 gttatcttcc tccccaactt ccttgtgcag aggaaggtgc tgaggcccct tcggacccag
361 acaggaggaa ccataatggc ggggaagctg gctgtggagc gaggctgggc catcaacgtg
421 gggggtggct tccaccactg ctccagcgac cgtggcgggg gcttctgtgc ctatgcggac
481 atcacgctcg ccatcaagtt tctgtttgag cgtgtggagg gcatctccag ggctaccatc
541 attgatcttg atgcccatca gggcaatggg catgagcgag acttcatgga cgacaagcgt
601 gtgtacatca tggatgtcta caaccgccac atctacccag gggaccgctt tgccaagcag
661 gccatcaggc ggaaggtgga gctggagtgg ggcacagagg atgatgagta cctggataag
721 gtggagagga acatcaagaa atccctccag gagcacctgc ccgacgtggt ggtatacaat
781 gcaggcaccg acatcctcga gggggaccgc cttggggggc tgtccatcag cccagcgggc
841 atcgtgaagc gggatgagct ggtgttccgg atggtccgtg gccgccgggt gcccatcctt
901 atggtgacct caggcgggta ccagaagcgc acagcccgca tcattgctga ctccatactt
961 aatctgtttg gcctggggct cattgggcct gagtcaccca gcgtctccgc acagaactca
1021 gacacaccgc tgcttccccc tgcagtgccc tgacccttgc tgccctgcct gtcacgtggc
1081 cctgcctatc cgccccttag tgctttttgt tttctaacct catggggtgg tggaggcagc
1141 cttcagtgag catggagggg cagggccatc cctggctggg gcctggagct ggcccttcct
1201 ctacttttcc ctgctggaag ccagaagggc ttgaggcctc tatgggtggg ggcagaaggc
1261 agagcctgtg tcccaggggg acccacacga agtcaccagc ccataggtcc agggaggcag
1321 gcagttaact gagaattgga gaggacaggc taggtcccag gcacagcgag ggccctgggc
1381 ttggggtgtt ctggttttga gaacggcaga cccaggtcgg agtgaggaag cttccacctc
1441 catcctgact aggcctgcat cctaactggg cctccctccc tccccttggt catgggattt
1501 gctgccctct ttgccccaga gctgaagagc tataggcact ggtgtggatg gcccaggagg
1561 tgctggagct aggtctccag gtgggcctgg ttcccaggca gcaggtggga accctgggcc
1621 tggatgtgag gggcggtcag gaaggggtac aggtgggttc cctcatctgg agttccccct
1681 caataaagca aggtctggac ctgcaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
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