LOCUS BC009387 2788 bp mRNA linear HUM 19-MAR-2009 DEFINITION Homo sapiens solute carrier family 18 (vesicular monoamine), member 1, mRNA (cDNA clone MGC:15281 IMAGE:4127678), complete cds. ACCESSION BC009387 VERSION BC009387.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2788) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2788) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC009387.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 26 Row: h Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4506986 The stop codon of the CDS annotated on this record is located > 55 bases upstream of a splice junction, and therefore the mRNA is predicted to be subject to nonsense-mediated mRNA decay (NMD). FEATURES Location/Qualifiers source 1..2788 /db_xref="H-InvDB:HIT000034326" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15281 IMAGE:4127678" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2788 /gene="SLC18A1" /gene_synonym="CGAT" /db_xref="GeneID:6570" /db_xref="HGNC:HGNC:10934" /db_xref="MIM:193002" CDS 187..1344 /gene="SLC18A1" /gene_synonym="CGAT" /codon_start=1 /product="SLC18A1 protein" /protein_id="AAH09387.1" /db_xref="GeneID:6570" /db_xref="HGNC:HGNC:10934" /db_xref="MIM:193002" /translation="MLRTILDAPQRLLKEGRASRQLVLVVVFVALLLDNMLFTVVVPI VPTFLYDMEFKEVNSSLHLGHAGSSPHALASPAFSTIFSFFNNNTVAVEESVPSGIAW MNDTASTIPPPATEAISAHKNNCLQGTGFLEEEITRVGVLFASKAVMQLLVNPFVGPL TNRIGYHIPMFAGFVIMFLSTVMFAFSGTYTLLFVARTLQGIGSSFSSVAGLGMLASV YTDDHERGRAMGTALGGLALGLLVGAPFGSVMYEFVGKSAPFLILAFLALLDGALQLC ILQPSKVSPESAKGTPLFMLLKDPYILVAAGSICFANMGVAILEPTLPIWMMQTMCSP KWQLGLAFLPASVSYLIGTNLFGVLANKMGRWLCSLIGMLVVGTSLLCLPS" BASE COUNT 607 a 725 c 666 g 790 t ORIGIN 1 ctgctgtctt gctaacagct gccaatacct cactgagtgc ctcacaccaa catgggctcc 61 aagtgagttt ccttcgtctg ggcagactcc ctcccctctt ccataaaggc tgcaggagac 121 ctgtagctgt cacaggacct tccctaagag cccgcagggg aagactgccc cagtccggcc 181 atcaccatgc tccggaccat tctggatgct ccccagcggt tgctgaagga ggggagagcg 241 tcccggcagc tggtgctggt ggtggtattc gtcgctttgc tcctggacaa catgctgttt 301 actgtggtgg tgccaattgt gcccaccttc ctatatgaca tggagttcaa agaagtcaac 361 tcttctctgc acctcggcca tgccggaagt tccccacatg ccctcgcctc tcctgccttt 421 tccaccatct tctccttctt caacaacaac accgtggctg ttgaagaaag cgtacctagt 481 ggaatagcat ggatgaatga cactgccagc accatcccac ctccagccac tgaagccatc 541 tcagctcata aaaacaactg cttgcaaggc acaggtttct tggaggaaga gattacccgg 601 gtcggggttc tgtttgcttc aaaggctgtg atgcaacttc tggtcaaccc attcgtgggc 661 cctctcacca acaggattgg atatcatatc cccatgtttg ctggctttgt tatcatgttt 721 ctctccacag ttatgtttgc tttttctggg acctatactc tactctttgt ggcccgaacc 781 cttcaaggca ttggatcttc attttcatct gttgcaggtc ttggaatgct ggccagtgtc 841 tacactgatg accatgagag aggacgagcc atgggaactg ctctgggggg cctggccttg 901 gggttgctgg tgggagctcc ctttggaagt gtaatgtacg agtttgttgg gaagtctgca 961 cccttcctca tcctggcctt cctggcacta ctggatggag cactccagct ttgcatccta 1021 cagccttcca aagtctctcc tgagagtgcc aaggggactc ccctctttat gcttctcaaa 1081 gacccttaca tcctggtggc tgcagggtcc atctgctttg ccaacatggg ggtggccatc 1141 ctggagccca cactgcccat ctggatgatg cagaccatgt gctcccccaa gtggcagctg 1201 ggtctagctt tcttgcctgc cagtgtgtcc tacctcattg gcaccaacct ctttggtgtg 1261 ttggccaaca agatgggtcg gtggctgtgt tccctaatcg ggatgctggt agtaggtacc 1321 agcttgctct gtctaccaag ttagaagtct aaatgaaacc tttcagtgat gtccataatg 1381 gaaaacagag gcaactttat tccatgaaga atgagaccag gagtgtatgt ttaggttcct 1441 ctggctcaca atatttttgg tctcattggc cccaatgcag ggcttggcct tgccataggc 1501 atggtggatt cttctatgat gcccatcatg gggcacctgg tggatctacg ccacacctcg 1561 gtgtatggga gtgtctacgc catcgctgat gtggcttttt gcatgggctt tgctataggt 1621 ccatccaccg gtggtgccat tgtaaaggcc atcggttttc cctggctcat ggtcatcact 1681 ggggtcatca acatcgtcta tgctccactc tgctactacc tgcggagccc cccggcaaag 1741 gaagagaagc ttgctattct gagtcaggac tgccccatgg agacccggat gtatgcaacc 1801 cagaagccca cgaaggaatt tcctctgggg gaggacagtg atgaggagcc tgaccatgag 1861 gagtagcagc agaaggtgct ccttgaattc atgatgcctc agtgaccacc tctttccctg 1921 ggaccagatc accatggctg agcccacggc tcagtgggct tcacatacct ctgcctggga 1981 atcttctttc ctcccctccc atggacactg tccctgatac tcttctcacc tgtgtaactt 2041 gtagctcttc ctctatgcct tggtgccgca gtggcccatc ttttatggga agacagagtg 2101 atgcaccttc ccgctgctgt gaggttgatt aaacttgagc tgtgacgggt tctgcaaggg 2161 gtgactcatt gcatagaggt ggtagtgagt aatgtgcccc tgaaaccagt ggggtgactg 2221 acaagcctct ttaatctgtt gcctgatttt ctctggcata gtcccaacag atcggaagag 2281 tgttaccctc ttttcctcaa cgtgttcttt cccgggtttt cccagccgag ttgagaaaat 2341 gttctcagca ttgtcttgct gccaaatgcc agcttgaaga gttttgtttt gttttttttc 2401 catttatttt ttttttttaa taaagtgagt gatttttctg tggctaaatc tagagctgct 2461 aaaagggctt taccctcagt gaaaagtgtc ttctattttc attatctttc agaaacagga 2521 gcccatttct cttctgctgg agttattgac attctcctga cctcccctgt gtgttcctac 2581 cttttctgaa cctcttagac tcttagaaat aaaagtagaa gaaagacaga aaaaataact 2641 gattagaccc aagatttcat gggaagaagt taaaagaaac tgccttgaaa tccctcctga 2701 ttgtagattt cctaatagga ggggtgtaat gtgacattgt tcatacttgc taataaatac 2761 attattgcct aaaaaaaaaa aaaaaaaa //