LOCUS BC009259 1911 bp mRNA linear HUM 18-AUG-2006 DEFINITION Homo sapiens homeobox containing 1, mRNA (cDNA clone IMAGE:3947903), partial cds. ACCESSION BC009259 VERSION BC009259.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1911) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1911) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC009259.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 25 Row: i Column: 1. FEATURES Location/Qualifiers source 1..1911 /db_xref="H-InvDB:HIT000034237" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3947903" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_9" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1911 /gene="HMBOX1" /gene_synonym="FLJ21616" /gene_synonym="HNF1LA" /gene_synonym="PBHNF" /db_xref="GeneID:79618" /db_xref="HGNC:HGNC:26137" CDS <1..1002 /gene="HMBOX1" /gene_synonym="FLJ21616" /gene_synonym="HNF1LA" /gene_synonym="PBHNF" /codon_start=1 /product="HMBOX1 protein" /protein_id="AAH09259.2" /db_xref="GeneID:79618" /db_xref="HGNC:HGNC:26137" /translation="GNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQ NGRENNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIK EEIKAFLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTNP GATLSMRPAPIPIEDPEWRQTPPPVSATSGTFRLRRGSRFTWRKECLAVMESYFNENQ YPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIAAILE SHGIDVQSPGGHSNSDDVDGNDYSEQDTWQVRNGEEEEGRSSEGGREAEKVEEERRI" BASE COUNT 610 a 420 c 446 g 435 t ORIGIN 1 gggaatagta ctaacaatgt cccagcatct tcctctacag ctacagcttc cacacagacg 61 cagcattcgg gaatgtcccc gtcacctagc aacagttatg atacttcccc acagccttgc 121 actaccaatc aaaatgggag ggagaataat gagcgattat ctacatccaa tggaaagatg 181 tcaccaactc gctaccatgc aaacagcatg ggtcagaggt catacagttt tgaagcctca 241 gaagaggacc tagatgtaga tgataaagtg gaagaattaa tgaggaggga cagcagtgtg 301 ataaaagagg aaatcaaagc ctttcttgcc aatcggagga tttcccaagc agttgttgca 361 caggtaacag gtatcagtca gagccggatc tctcattggc tgttgcagca gggatcagac 421 ctgagtgaac agaagaaaag agcattttac cgatggtatc aacttgagaa gacaaaccct 481 ggcgctacac taagtatgag accagccccc attccaatag aggaccctga atggagacaa 541 acgcctcccc cagtctctgc cacatctggt actttccgac tgcgacgagg gagtcgattt 601 acctggagaa aggagtgcct ggctgttatg gaaagttact tcaatgagaa tcaataccca 661 gatgaagcaa agagggaaga aattgcaaac gcttgcaatg cagttataca gaagccaggc 721 aaaaagctgt cagatctgga aagagttacc tccctgaaag tatataattg gtttgctaac 781 agaaggaagg agatcaagag gagagccaat attgcagcaa tcctggagag tcatgggata 841 gatgtgcaga gtccaggagg ccactcaaac agtgatgatg tcgacgggaa tgactactct 901 gagcaggata cttggcaagt acgcaatggg gaggaggagg agggaagaag ttcagaggga 961 ggcagagaag cagagaaggt agaagaagag aggaggatct gatccaaaca agatgacagt 1021 acgagccata gtgaccacca agaccccatc tcattagctg tggaaatggc agcagtcaac 1081 cacactatct tggcattggc ccgacaagga gccaacgaaa tcaagacaga ggccctggat 1141 gatgactgat cagggaggtt aaacatgaca agttaactta gtttagacgt agcaccttag 1201 cagactttcc tcggtcctta acatgtgttc ttacagtata acttgcagtt tcttgtatgt 1261 caggtagctg ttagggtctt gttctgtgaa gatggcatgg tgccctcagc ctttgcatat 1321 actatctcag tattaactcc cagtaaataa taaccaacca accaaccaaa cttccctctc 1381 ccagcccccg aggctagaaa atcttgctgc tccgtcttag cattccaaga aagtgcttcc 1441 aggtatttag atagccctca gttctcaaat attagactac gtgtaaaatc ttgggtacct 1501 ttagattctt gtaacactag tctgtactcc cttttccttc cccaagactg ataggatgca 1561 agctgaggtc gtggcacagg aatgacagac accatttggg gagtatccac agagtcaaag 1621 gaacactaga atccccacct cagcgtgagg ataattgatt tccagctgca ataagccgtg 1681 cctcattata gccacactgt ggctagatta tacttctttg ggtgctgtgc taagaatgtc 1741 aatggaaaaa gccgatctca gattttgttt gaagttaaca tgcctgacac agacatcctt 1801 tcctctcaca agctgtgtga cttagtagat aaaatactgc cttctgcctt tgggaccatg 1861 attaaaaaca aagacaaaaa ccaaaagtca ttaaaaaaaa aaaaaaaaaa a //