LOCUS BC009235 2963 bp mRNA linear HUM 19-JUN-2006 DEFINITION Homo sapiens hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit, mRNA (cDNA clone MGC:1728 IMAGE:2966432), complete cds. ACCESSION BC009235 VERSION BC009235.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2963) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2963) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-JUN-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC009235.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis M. Staudt, M.D., Ph.D. cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 3 Row: m Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 37059733. FEATURES Location/Qualifiers source 1..2963 /db_xref="H-InvDB:HIT000034217" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1728 IMAGE:2966432" /tissue_type="Lymph, Burkitt lymphoma" /clone_lib="NIH_MGC_8" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2963 /gene="HADHA" /gene_synonym="GBP" /gene_synonym="HADH" /gene_synonym="LCHAD" /gene_synonym="MGC1728" /gene_synonym="MTPA" /gene_synonym="TP-ALPHA" /db_xref="GeneID:3030" /db_xref="HGNC:HGNC:4801" /db_xref="MIM:600890" CDS 26..2317 /gene="HADHA" /gene_synonym="GBP" /gene_synonym="HADH" /gene_synonym="LCHAD" /gene_synonym="MGC1728" /gene_synonym="MTPA" /gene_synonym="TP-ALPHA" /codon_start=1 /product="hydroxyacyl-Coenzyme A dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenzyme A hydratase (trifunctional protein), alpha subunit" /protein_id="AAH09235.1" /db_xref="GeneID:3030" /db_xref="HGNC:HGNC:4801" /db_xref="MIM:600890" /translation="MVACRAIGILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYG VKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGA DINMLAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRI ATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLV DQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIP FVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTK ESKALMGLYHGQVLCKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDA TLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFE DLSLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQL LEIITTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGV DPKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVS KGFLGRKSGKGFYIYQEGVKRKDLNSDMDSILASLKLPPKSEVSSDEDIQFRLVTRFV NEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAY GKQFTPCQLLADHANSPNKKFYQ" BASE COUNT 841 a 663 c 770 g 689 t ORIGIN 1 ccactgctgt cctcttcagc tcaagatggt ggcctgccgg gcgattggca tcctcagccg 61 cttttctgcc ttcaggatcc tccgctcccg aggttatata tgccgcaatt ttacagggtc 121 ttctgctttg ctgaccagaa cccatattaa ctatggagtc aaaggggatg tggcagttgt 181 tcgaattaac tctcccaatt caaaggtaaa tacactgagt aaagagctac attcagagtt 241 ctcagaagtt atgaatgaaa tctgggctag tgatcaaatc agaagtgccg tccttatctc 301 atcaaagcca ggctgcttta ttgcaggtgc tgatatcaac atgttagccg cttgcaagac 361 ccttcaagaa gtaacacagc tatcacaaga agcacagaga atagttgaga aacttgaaaa 421 gtccacaaag cctattgtgg ctgccatcaa tggatcctgc ctgggaggag gacttgaggt 481 tgccatttca tgccaataca gaatagcaac aaaagacaga aaaacagtat taggtacccc 541 tgaagttttg ctgggggcct taccaggagc aggaggcaca caaaggctgc ccaaaatggt 601 gggtgtgcct gctgctttgg acatgatgct gactggtaga agcattcgtg cagacagggc 661 aaagaaaatg ggactggttg accaactggt ggaacccctg ggaccaggac taaaacctcc 721 agaggaacgg acaatagaat acctagaaga agttgcaatt acttttgcca aaggactagc 781 tgataagaag atctctccaa agagagacaa gggattggtg gaaaaattga cagcgtatgc 841 catgactatt ccatttgtca ggcaacaggt ttacaaaaaa gtggaagaaa aagtgcgaaa 901 gcagactaaa ggcctttatc ctgcacctct gaaaataatt gatgtggtaa agactggaat 961 tgagcaaggg agtgatgccg gttatctctg tgaatctcag aaatttggag agcttgtaat 1021 gaccaaagaa tcaaaggcct tgatgggact ctaccatggt caggtcctgt gcaagaagaa 1081 taaatttgga gctccacaga aggatgttaa gcatctggct attcttggtg cagggctgat 1141 gggagcaggc atcgcccaag tctccgtgga taaggggcta aagactatac ttaaagatgc 1201 caccctcact gcgctagacc gaggacagca acaagtgttc aaaggattga atgacaaagt 1261 gaagaagaaa gctctaacat catttgaaag ggattccatc ttcagcaact tgactgggca 1321 gcttgattac caaggttttg aaaaggccga catggtgatt gaagctgtgt ttgaggacct 1381 tagtcttaag cacagagtgc taaaggaagt agaagcggtg attccagatc actgtatctt 1441 tgccagtaac acatctgctc tcccaatcag tgaaatcgct gctgtcagca aaagacctga 1501 gaaggtgatt ggcatgcact acttctctcc cgtggacaag atgcagctgc tggagattat 1561 cacgaccgag aaaacttcca aagacaccag tgcttcagct gtagcagttg gtctcaagca 1621 ggggaaggtc atcattgtgg ttaaggatgg acctggcttc tatactacca ggtgtcttgc 1681 gcccatgatg tctgaagtca tccgaatcct ccaggaagga gttgacccga agaagctgga 1741 ttccctgacc acaagctttg gctttcctgt gggtgccgcc acactggtgg atgaagttgg 1801 tgtggatgta gcgaaacatg tggcggaaga tctgggcaaa gtctttgggg agcggtttgg 1861 aggtggaaac ccagaactgc tgacacagat ggtgtccaag ggcttcctag gtcgtaaatc 1921 tgggaagggc ttttacatct atcaggaggg tgtgaagagg aaggatttga attctgacat 1981 ggatagtatt ttagcgagtc tgaagctgcc tcctaagtct gaagtctcat cagacgaaga 2041 catccagttc cgcctggtga caagatttgt gaatgaggca gtcatgtgcc tgcaagaggg 2101 gatcttggcc acacctgcag agggagacat cggagccgtc tttgggcttg gcttcccgcc 2161 ttgtctggga gggcctttcc gctttgtgga tctgtatggc gcccagaaga tagtggaccg 2221 gctcaagaaa tatgaagctg cctatggaaa acagttcacc ccatgccagc tgctagctga 2281 ccatgctaac agccctaaca agaagttcta ccagtgagca ggcctcatgc ctcgctcagt 2341 cagtgcacta accccagctg ccggcagtgc tggttctcca acagagtggt gtctagattt 2401 atcagagtaa cgagaagaca aactccggca ctgggtttgc tccctgatta aagtgccttc 2461 agccaagacc atctctccct cctggtgaag tgtgacttcg aattagtttg cacttcctat 2521 tggaaggtag agcccactgc tcattgtata agccccgagg cctagagtgg cagccaagag 2581 ccatctgaag ccacctctct gcctgttcct cccaagaggc cagggtggcc aggggtggtg 2641 agggcagttc tgcacccagc caaacacata acaataaaaa ccaaactctg tgtcagcatc 2701 tttgcccttc tggtttaaac gcctccttca aaaagcaatc tggaagaaag ccctgtgctt 2761 tgggggagta agaatgtgtg tgcagaattc taggcagcac cttagggagg gactgggatg 2821 agagaaagtg ggacctggtg ggctcaacca cacacacctg tctgtgcaga tgctttgccc 2881 aggcttctca ccacggtgta ccgggatatt aaacctcttt ccccagcaaa aaaaaaaaaa 2941 aaaaaaaaaa aaaaaaaaaa aaa //