LOCUS       BC008955                1728 bp    mRNA    linear   HUM 04-NOV-2003
DEFINITION  Homo sapiens ubiquitin C, mRNA (cDNA clone IMAGE:3030313), partial
            cds.
ACCESSION   BC008955
VERSION     BC008955.2
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1728)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1728)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Oct 31, 2003 this sequence version replaced BC008955.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 10 Row: b Column: 16
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 20149305.
FEATURES             Location/Qualifiers
     source          1..1728
                     /db_xref="H-InvDB:HIT000034104"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3030313"
                     /tissue_type="Ovary, adenocarcinoma"
                     /clone_lib="NIH_MGC_9"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..1728
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /db_xref="GeneID:7316"
                     /db_xref="MIM:191340"
     CDS             <1..1643
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /codon_start=3
                     /product="UBC protein"
                     /protein_id="AAH08955.2"
                     /db_xref="GeneID:7316"
                     /db_xref="MIM:191340"
                     /translation="QFLFVDCCDRHLTMQIFVKTLTGKTITLEVEPSDTIENVKAKIQ
                     DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
                     TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
                     RLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG
                     RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG
                     IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV
                     EPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
                     GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
                     DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPD
                     QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGV"
     misc_feature    42..263
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /note="ubiquitin; Region: Ubiquitin family. This family
                     contains a number of ubiquitin-like proteins: SUMO (smt3
                     homologue), Nedd8, Elongin B, Rub1"
                     /db_xref="CDD:pfam00240"
     misc_feature    270..491
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /note="ubiquitin; Region: Ubiquitin family. This family
                     contains a number of ubiquitin-like proteins: SUMO (smt3
                     homologue), Nedd8, Elongin B, Rub1"
                     /db_xref="CDD:pfam00240"
     misc_feature    498..719
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /note="ubiquitin; Region: Ubiquitin family. This family
                     contains a number of ubiquitin-like proteins: SUMO (smt3
                     homologue), Nedd8, Elongin B, Rub1"
                     /db_xref="CDD:pfam00240"
     misc_feature    726..947
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /note="ubiquitin; Region: Ubiquitin family. This family
                     contains a number of ubiquitin-like proteins: SUMO (smt3
                     homologue), Nedd8, Elongin B, Rub1"
                     /db_xref="CDD:pfam00240"
     misc_feature    954..1175
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /note="ubiquitin; Region: Ubiquitin family. This family
                     contains a number of ubiquitin-like proteins: SUMO (smt3
                     homologue), Nedd8, Elongin B, Rub1"
                     /db_xref="CDD:pfam00240"
     misc_feature    1182..1403
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /note="ubiquitin; Region: Ubiquitin family. This family
                     contains a number of ubiquitin-like proteins: SUMO (smt3
                     homologue), Nedd8, Elongin B, Rub1"
                     /db_xref="CDD:pfam00240"
     misc_feature    1410..1631
                     /gene="UBC"
                     /gene_synonym="HMG20"
                     /note="ubiquitin; Region: Ubiquitin family. This family
                     contains a number of ubiquitin-like proteins: SUMO (smt3
                     homologue), Nedd8, Elongin B, Rub1"
                     /db_xref="CDD:pfam00240"
BASE COUNT          489 a          451 c          438 g          350 t
ORIGIN      
        1 cgcagttctt gtttgtggat tgctgtgatc gtcacttgac aatgcagatc ttcgtgaaga
       61 ctctgactgg taagaccatc accctcgagg ttgagcccag tgacaccatc gagaatgtca
      121 aggcaaagat ccaagataag gaaggcatcc ctcctgacca gcagaggctg atctttgctg
      181 gaaaacagct ggaagatggg cgcaccctgt ctgactacaa catccagaaa gagtccaccc
      241 tgcacctggt gctccgtctc agaggtggga tgcaaatctt cgtgaagaca ctcactggca
      301 agaccatcac ccttgaggtc gagcccagtg acaccatcga gaacgtcaaa gcaaagatcc
      361 aggacaagga aggcattcct cctgaccagc agaggttgat ctttgccgga aagcagctgg
      421 aagatgggcg caccctgtct gactacaaca tccagaaaga gtctaccctg cacctggtgc
      481 tccgtctcag aggtgggatg cagatcttcg tgaagaccct gactggtaag accatcaccc
      541 tcgaggtgga gcccagtgac accatcgaga atgtcaaggc aaagatccaa gataaggaag
      601 gcattcctcc tgatcagcag aggttgatct ttgccggaaa acagctggaa gatggtcgta
      661 ccctgtctga ctacaacatc cagaaagagt ccaccttgca cctggtactc cgtctcagag
      721 gtgggatgca aatcttcgtg aagacactca ctggcaagac catcaccctt gaggtcgagc
      781 ccagtgacac tatcgagaac gtcaaagcaa agatccaaga caaggaaggc attcctcctg
      841 accagcagag gttgatcttt gccggaaagc agctggaaga tgggcgcacc ctgtctgact
      901 acaacatcca gaaagagtct accctgcacc tggtgctccg tctcagaggt gggatgcaga
      961 tcttcgtgaa gaccctgact ggtaagacca tcactctcga agtggagccg agtgacacca
     1021 ttgagaatgt caaggcaaag atccaagaca aggaaggcat ccctcctgac cagcagaggt
     1081 tgatctttgc cggaaaacag ctggaagatg gtcgtaccct gtctgactac aacatccaga
     1141 aagagtccac cctgcacctg gtgctccgtc tcagaggtgg gatgcagatc ttcgtgaaga
     1201 ccctgactgg taagaccatc actctcgaag tggagccgag tgacaccatt gagaatgtca
     1261 aggcaaagat ccaagacaag gaaggcatcc ctcctgacca gcagaggttg atctttgctg
     1321 ggaaacagct ggaagatgga cgcaccctgt ctgactacaa catccagaaa gagtccaccc
     1381 tgcacctggt gctccgtctc agaggtggga tgcaaatctt cgtgaagacc ctgactggta
     1441 agaccatcac cctcgaggtg gagcccagtg acaccatcga gaatgtcaag gcaaagatcc
     1501 aagataagga aggcatccct cctgatcagc agaggttgat ctttgctggg aaacagctgg
     1561 aagatggacg caccctgtct gactacaaca tccagaaaga gtccactctg cacttggtcc
     1621 tgcgcttgag ggggggtgtc taagtttccc cttttaaggt ttcaacaaat ttcattgcac
     1681 tttcctttca ataaagttgt tgcattccca aaaaaaaaaa aaaaaaaa
//