LOCUS       BC008755                3320 bp    mRNA    linear   HUM 16-SEP-2003
DEFINITION  Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 2,
            mRNA (cDNA clone IMAGE:3344721), partial cds.
ACCESSION   BC008755
VERSION     BC008755.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3320)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3320)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 5 Row: d Column: 15.
FEATURES             Location/Qualifiers
     source          1..3320
                     /db_xref="H-InvDB:HIT000087148"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3344721"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_16"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..3320
                     /gene="ABCA2"
                     /gene_synonym="ABC2"
                     /gene_synonym="KIAA1062"
                     /db_xref="GeneID:20"
                     /db_xref="MIM:600047"
     CDS             <1..2606
                     /gene="ABCA2"
                     /gene_synonym="ABC2"
                     /gene_synonym="KIAA1062"
                     /codon_start=3
                     /product="ABCA2 protein"
                     /protein_id="AAH08755.1"
                     /db_xref="GeneID:20"
                     /db_xref="MIM:600047"
                     /translation="RFFDSMCLESFTQGLPLSNFVPPPPSPAPSDSPASPDEDLQAWN
                     VSLPPTAGPEMWTSAPSLPRLVREPVRCTCSAQGTGFSCPSSVGGHPPQMRVVAGDIL
                     TDITGHNVSEYLLFTSDRFRLHRYGAITFGNVLKSIPASFGTRAPPMVRKIAVRRAAQ
                     VFYNNKGYHSMPTYLNSLNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYL
                     LQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPIIYWLANYVWDM
                     LNYLVPATCCVIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSS
                     AYVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEM
                     AYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAMAVEGVVGFLLTIMCQYNFLRRPQ
                     RMPVSTKPVEDDVDVASERQRVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLG
                     VRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKELLQVQQSLGYCPQ
                     CDALFDELTAREHLQLYTRLRGISWKDEARVVKWALEKLELTKYADKPAGTYSGGNKR
                     KLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEA
                     LCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQSVKDVVRFFNRNFPEAML
                     KERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKKQSD
                     NLEQQETEPPSALQSPLGCLLSLLRPRSAPTELRALVADEPEDLDTEDEGLISFEEER
                     AQLSFNTDTLC"
     misc_feature    1443..2300
                     /gene="ABCA2"
                     /gene_synonym="ABC2"
                     /gene_synonym="KIAA1062"
                     /note="CcmA; Region: ABC-type multidrug transport system,
                     ATPase component [Defense mechanisms]"
                     /db_xref="CDD:COG1131"
BASE COUNT          640 a         1112 c          949 g          619 t
ORIGIN      
        1 ctcggttctt cgacagcatg tgtctggagt ccttcacaca ggggctgcca ctgtccaatt
       61 tcgtgccacc cccaccctcg cccgccccat ctgactcgcc agcgtccccg gatgaggacc
      121 tgcaggcctg gaacgtctcc ctgccgccca ccgctgggcc agaaatgtgg acgtcggcac
      181 cctccctgcc gcgcctggta cgggagcccg tccgctgcac ctgctctgcg cagggcaccg
      241 gcttctcctg ccccagcagt gtgggcgggc acccgcccca gatgcgggtg gtcgcaggcg
      301 acatcctgac cgacatcacc ggccacaatg tctctgagta cctgctcttc acctccgacc
      361 gcttccgact gcaccggtat ggggccatca cctttggaaa cgtcctgaag tccatcccag
      421 cctcatttgg caccagggcc ccacccatgg tgcggaagat cgcggtgcgc agggctgccc
      481 aggttttcta caacaacaag ggctatcaca gcatgcccac ctacctcaac agcctcaaca
      541 acgccatcct gcgtgccaac ctgcccaaga gcaagggcaa cccggcggct tacggcatca
      601 ccgtcaccaa ccaccccatg aataagacca gcgccagcct ctccctggat tacctgctgc
      661 agggcacgga tgtcgtcatc gccatcttca tcatcgtggc catgtccttc gtgccggcca
      721 gcttcgttgt cttcctcgtg gccgagaagt ccaccaaggc caagcatctg cagtttgtca
      781 gcggctgcaa ccccatcatc tactggctgg cgaactacgt gtgggacatg ctcaactacc
      841 tggtccccgc tacctgctgt gtcatcatcc tgtttgtgtt cgacctgccg gcctacacgt
      901 cgcccaccaa cttccctgcc gtcctctccc tcttcctgct ctatgggtgg tccatcacgc
      961 ccatcatgta cccggcctcc ttctggttcg aggtccccag ctccgcctac gtgttcctca
     1021 ttgtcatcaa tctcttcatc ggcatcaccg ccaccgtggc caccttcctg ctacagctct
     1081 tcgagcacga caaggacctg aaggttgtca acagttacct gaaaagctgc ttcctcattt
     1141 tccccaacta caacctgggc cacgggctca tggagatggc ctacaacgag tacatcaacg
     1201 agtactacgc caagattggc cagtttgaca agatgaagtc cccgttcgag tgggacattg
     1261 tcacccgcgg actggtggcc atggcggttg agggcgtcgt gggcttcctc ctgaccatca
     1321 tgtgccagta caacttcctg cggcggccac agcgcatgcc tgtgtctacc aagcctgtgg
     1381 aggatgatgt ggacgtggcc agtgagcggc agcgagtgct ccggggagac gccgacaatg
     1441 acatggtcaa gattgagaac ctgaccaagg tctacaagtc ccggaagatt ggccgtatcc
     1501 tggccgttga ccgcctgtgc ctgggtgtgc gtcctggcga gtgcttcggg ctcctgggcg
     1561 tcaacggtgc gggcaagacc agcaccttca agatgctgac cggcgacgag agcacgacgg
     1621 ggggcgaggc cttcgtcaat ggacacagcg tgctgaagga gctgctccag gtgcagcaga
     1681 gcctcggcta ctgcccgcag tgtgacgcgc tgttcgacga gctcacggcc cgggagcacc
     1741 tgcagctgta cacgcggctg cgtgggatct cctggaagga cgaggcccgg gtggtgaagt
     1801 gggctctgga gaagctggag ctgaccaagt acgcagacaa gccggctggc acctacagcg
     1861 gcggcaacaa gcggaagctc tccacggcca tcgccctcat tgggtaccca gccttcatct
     1921 tcctggacga gcccaccaca ggcatggacc ccaaggcccg gcgcttcctc tggaacctca
     1981 tcctcgacct catcaagaca gggcgttcag tggtgctgac atcacacagc atggaggagt
     2041 gcgaggcgct gtgcacgcgg ctggccatca tggtgaacgg tcgcctgcgg tgcctgggca
     2101 gcatccagca cctgaagaac cggtttggag atggctacat gatcacggtg cggaccaaga
     2161 gcagccagag tgtgaaggac gtggtgcggt tcttcaaccg caacttcccg gaagccatgc
     2221 tcaaggagcg gcaccacaca aaggtgcagt accagctcaa gtcggagcac atctcgctgg
     2281 cccaggtgtt cagcaagatg gagcaggtgt ctggcgtgct gggcatcgag gactactcgg
     2341 tcagccagac cacactggac aatgtgttcg tgaactttgc caagaagcag agtgacaacc
     2401 tggagcagca ggagacggag ccgccatccg cactgcagtc ccctctcggc tgcttgctca
     2461 gcctgctccg gccccggtct gcccccacgg agctccgggc acttgtggca gacgagcccg
     2521 aggacctgga cacggaggac gagggcctca tcagcttcga ggaggagcgg gcccagctgt
     2581 ccttcaacac ggacacgctc tgctgaccac ccagagctgg gccagggagg acacgctcca
     2641 ctgaccaccc agagctgggc cagggactca acaatgggga cagaagtccc ccagtgcctg
     2701 ccagggcctg gagtggaggt tcaggaccaa ggggcttctg gtcctccagc ccctgtactc
     2761 ggccatgccc tgcggtcact gcggttgccg cccctaattg tgccaaaggc tgacccggcc
     2821 cgggctgcgt acacccttgc cctgctttgc cttaaagcct cggggtctgc ccggcccctc
     2881 gcccctgcct ggcactgctc accgcccaag gcgacgccgg ctggaccagg cactgctggc
     2941 ctttctcctg cccggcctcg gaaccagctt ttctctctta cgatgaaggc tgatgccgag
     3001 agcgggctgt gggcggagct gggtcagtcc cgtatttatt ttgctttgag aagaggctcc
     3061 tctggccctg ctctcctgca gggaggtggc tgtcccgcgg gaagccatca gcttgggcca
     3121 gctggcaggt ggcaggaatg gagaagctga ccctgctggc caggcaaggg gccagacccc
     3181 ccccaacccc cagctgccat cgctctccca cccagcttgg ccccctgccc gcccacctcc
     3241 ctgggagccg ggcctgtaca tagcgcacag atgtttgttt taaataaata aacaaaatgt
     3301 caaaaaaaaa aaaaaaaaaa
//