LOCUS BC008755 3320 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 2,
mRNA (cDNA clone IMAGE:3344721), partial cds.
ACCESSION BC008755
VERSION BC008755.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3320)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3320)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: d Column: 15.
FEATURES Location/Qualifiers
source 1..3320
/db_xref="H-InvDB:HIT000087148"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3344721"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3320
/gene="ABCA2"
/gene_synonym="ABC2"
/gene_synonym="KIAA1062"
/db_xref="GeneID:20"
/db_xref="MIM:600047"
CDS <1..2606
/gene="ABCA2"
/gene_synonym="ABC2"
/gene_synonym="KIAA1062"
/codon_start=3
/product="ABCA2 protein"
/protein_id="AAH08755.1"
/db_xref="GeneID:20"
/db_xref="MIM:600047"
/translation="RFFDSMCLESFTQGLPLSNFVPPPPSPAPSDSPASPDEDLQAWN
VSLPPTAGPEMWTSAPSLPRLVREPVRCTCSAQGTGFSCPSSVGGHPPQMRVVAGDIL
TDITGHNVSEYLLFTSDRFRLHRYGAITFGNVLKSIPASFGTRAPPMVRKIAVRRAAQ
VFYNNKGYHSMPTYLNSLNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYL
LQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPIIYWLANYVWDM
LNYLVPATCCVIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSS
AYVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEM
AYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAMAVEGVVGFLLTIMCQYNFLRRPQ
RMPVSTKPVEDDVDVASERQRVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLG
VRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKELLQVQQSLGYCPQ
CDALFDELTAREHLQLYTRLRGISWKDEARVVKWALEKLELTKYADKPAGTYSGGNKR
KLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEA
LCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSSQSVKDVVRFFNRNFPEAML
KERHHTKVQYQLKSEHISLAQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKKQSD
NLEQQETEPPSALQSPLGCLLSLLRPRSAPTELRALVADEPEDLDTEDEGLISFEEER
AQLSFNTDTLC"
misc_feature 1443..2300
/gene="ABCA2"
/gene_synonym="ABC2"
/gene_synonym="KIAA1062"
/note="CcmA; Region: ABC-type multidrug transport system,
ATPase component [Defense mechanisms]"
/db_xref="CDD:COG1131"
BASE COUNT 640 a 1112 c 949 g 619 t
ORIGIN
1 ctcggttctt cgacagcatg tgtctggagt ccttcacaca ggggctgcca ctgtccaatt
61 tcgtgccacc cccaccctcg cccgccccat ctgactcgcc agcgtccccg gatgaggacc
121 tgcaggcctg gaacgtctcc ctgccgccca ccgctgggcc agaaatgtgg acgtcggcac
181 cctccctgcc gcgcctggta cgggagcccg tccgctgcac ctgctctgcg cagggcaccg
241 gcttctcctg ccccagcagt gtgggcgggc acccgcccca gatgcgggtg gtcgcaggcg
301 acatcctgac cgacatcacc ggccacaatg tctctgagta cctgctcttc acctccgacc
361 gcttccgact gcaccggtat ggggccatca cctttggaaa cgtcctgaag tccatcccag
421 cctcatttgg caccagggcc ccacccatgg tgcggaagat cgcggtgcgc agggctgccc
481 aggttttcta caacaacaag ggctatcaca gcatgcccac ctacctcaac agcctcaaca
541 acgccatcct gcgtgccaac ctgcccaaga gcaagggcaa cccggcggct tacggcatca
601 ccgtcaccaa ccaccccatg aataagacca gcgccagcct ctccctggat tacctgctgc
661 agggcacgga tgtcgtcatc gccatcttca tcatcgtggc catgtccttc gtgccggcca
721 gcttcgttgt cttcctcgtg gccgagaagt ccaccaaggc caagcatctg cagtttgtca
781 gcggctgcaa ccccatcatc tactggctgg cgaactacgt gtgggacatg ctcaactacc
841 tggtccccgc tacctgctgt gtcatcatcc tgtttgtgtt cgacctgccg gcctacacgt
901 cgcccaccaa cttccctgcc gtcctctccc tcttcctgct ctatgggtgg tccatcacgc
961 ccatcatgta cccggcctcc ttctggttcg aggtccccag ctccgcctac gtgttcctca
1021 ttgtcatcaa tctcttcatc ggcatcaccg ccaccgtggc caccttcctg ctacagctct
1081 tcgagcacga caaggacctg aaggttgtca acagttacct gaaaagctgc ttcctcattt
1141 tccccaacta caacctgggc cacgggctca tggagatggc ctacaacgag tacatcaacg
1201 agtactacgc caagattggc cagtttgaca agatgaagtc cccgttcgag tgggacattg
1261 tcacccgcgg actggtggcc atggcggttg agggcgtcgt gggcttcctc ctgaccatca
1321 tgtgccagta caacttcctg cggcggccac agcgcatgcc tgtgtctacc aagcctgtgg
1381 aggatgatgt ggacgtggcc agtgagcggc agcgagtgct ccggggagac gccgacaatg
1441 acatggtcaa gattgagaac ctgaccaagg tctacaagtc ccggaagatt ggccgtatcc
1501 tggccgttga ccgcctgtgc ctgggtgtgc gtcctggcga gtgcttcggg ctcctgggcg
1561 tcaacggtgc gggcaagacc agcaccttca agatgctgac cggcgacgag agcacgacgg
1621 ggggcgaggc cttcgtcaat ggacacagcg tgctgaagga gctgctccag gtgcagcaga
1681 gcctcggcta ctgcccgcag tgtgacgcgc tgttcgacga gctcacggcc cgggagcacc
1741 tgcagctgta cacgcggctg cgtgggatct cctggaagga cgaggcccgg gtggtgaagt
1801 gggctctgga gaagctggag ctgaccaagt acgcagacaa gccggctggc acctacagcg
1861 gcggcaacaa gcggaagctc tccacggcca tcgccctcat tgggtaccca gccttcatct
1921 tcctggacga gcccaccaca ggcatggacc ccaaggcccg gcgcttcctc tggaacctca
1981 tcctcgacct catcaagaca gggcgttcag tggtgctgac atcacacagc atggaggagt
2041 gcgaggcgct gtgcacgcgg ctggccatca tggtgaacgg tcgcctgcgg tgcctgggca
2101 gcatccagca cctgaagaac cggtttggag atggctacat gatcacggtg cggaccaaga
2161 gcagccagag tgtgaaggac gtggtgcggt tcttcaaccg caacttcccg gaagccatgc
2221 tcaaggagcg gcaccacaca aaggtgcagt accagctcaa gtcggagcac atctcgctgg
2281 cccaggtgtt cagcaagatg gagcaggtgt ctggcgtgct gggcatcgag gactactcgg
2341 tcagccagac cacactggac aatgtgttcg tgaactttgc caagaagcag agtgacaacc
2401 tggagcagca ggagacggag ccgccatccg cactgcagtc ccctctcggc tgcttgctca
2461 gcctgctccg gccccggtct gcccccacgg agctccgggc acttgtggca gacgagcccg
2521 aggacctgga cacggaggac gagggcctca tcagcttcga ggaggagcgg gcccagctgt
2581 ccttcaacac ggacacgctc tgctgaccac ccagagctgg gccagggagg acacgctcca
2641 ctgaccaccc agagctgggc cagggactca acaatgggga cagaagtccc ccagtgcctg
2701 ccagggcctg gagtggaggt tcaggaccaa ggggcttctg gtcctccagc ccctgtactc
2761 ggccatgccc tgcggtcact gcggttgccg cccctaattg tgccaaaggc tgacccggcc
2821 cgggctgcgt acacccttgc cctgctttgc cttaaagcct cggggtctgc ccggcccctc
2881 gcccctgcct ggcactgctc accgcccaag gcgacgccgg ctggaccagg cactgctggc
2941 ctttctcctg cccggcctcg gaaccagctt ttctctctta cgatgaaggc tgatgccgag
3001 agcgggctgt gggcggagct gggtcagtcc cgtatttatt ttgctttgag aagaggctcc
3061 tctggccctg ctctcctgca gggaggtggc tgtcccgcgg gaagccatca gcttgggcca
3121 gctggcaggt ggcaggaatg gagaagctga ccctgctggc caggcaaggg gccagacccc
3181 ccccaacccc cagctgccat cgctctccca cccagcttgg ccccctgccc gcccacctcc
3241 ctgggagccg ggcctgtaca tagcgcacag atgtttgttt taaataaata aacaaaatgt
3301 caaaaaaaaa aaaaaaaaaa
//