LOCUS BC008724 2665 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens splicing factor 1, mRNA (cDNA clone MGC:8657 IMAGE:2961666), complete cds. ACCESSION BC008724 VERSION BC008724.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2665) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2665) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC008724.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: n Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42544129. FEATURES Location/Qualifiers source 1..2665 /db_xref="H-InvDB:HIT000033924" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8657 IMAGE:2961666" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2665 /gene="SF1" /gene_synonym="D11S636" /gene_synonym="ZFM1" /db_xref="GeneID:7536" /db_xref="HGNC:HGNC:12950" /db_xref="MIM:601516" CDS 149..1795 /gene="SF1" /gene_synonym="D11S636" /gene_synonym="ZFM1" /codon_start=1 /product="splicing factor 1" /protein_id="AAH08724.1" /db_xref="GeneID:7536" /db_xref="HGNC:HGNC:12950" /db_xref="MIM:601516" /translation="MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGL TREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTR KKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPR GNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKA VEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNT TVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSG PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGG GPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQY LGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPP PPPPPSSSMASSTPLPWQQRSLPAAAMARAMRVRTFRAHW" BASE COUNT 612 a 788 c 679 g 586 t ORIGIN 1 gcgtctcgcg ccgccgccgc ccgccgcgtg agaggacggg ctccgcgcgc tccggcagcg 61 cattcgggtc ccctcccccc gggaggcttg cgaaggagaa gccgccgcag aggaaaagca 121 ggtgccggtg cctgtccccg ggggcgccat ggcgaccgga gcgaacgcca cgccgttgga 181 cttcccaagt aagaagcgga agaggagccg ctggaaccaa gacacaatgg aacagaagac 241 agtgattcca ggaatgccta cagttattcc ccctggactt actcgagaac aagaaagagc 301 ttatatagtg caactgcaga tagaagacct gactcgtaaa ctgcgcacag gagacctggg 361 catcccccct aaccctgagg acaggtcccc ttcccctgag cccatctaca atagcgaggg 421 gaagcggctt aacacccgag agttccgcac ccgcaaaaag ctggaagagg agcggcacaa 481 cctcatcaca gagatggttg cactcaatcc ggatttcaag ccacctgcag attacaaacc 541 tccagcaaca cgtgtgagtg ataaagtcat gattccacaa gatgagtacc cagaaatcaa 601 ctttgtgggg ctgctcatcg ggcccagagg gaacaccctg aagaacatag agaaggagtg 661 caatgccaag attatgatcc gggggaaagg gtctgtgaaa gaagggaagg ttgggcgcaa 721 agatggccag atgttgccag gagaagatga gccacttcat gccctggtta ctgccaatac 781 aatggagaac gtcaaaaagg cagtggaaca gataagaaac atcctgaagc agggtatcga 841 gactccagag gaccagaatg atctacggaa gatgcagctt cgggagttgg ctcgcttaaa 901 tgggaccctt cgggaagacg ataacaggat cttaagaccc tggcagagct cagagacccg 961 cagcattacc aacaccacag tgtgtaccaa gtgtggaggg gctggccaca ttgcttcaga 1021 ctgtaaattc caaaggcctg gtgatcctca gtcagctcag gataaagcac ggatggataa 1081 agaatatttg tccctcatgg ctgaactggg tgaagcacct gtcccagcat ctgtgggctc 1141 cacctctggg cctgccacca cacccctggc cagcgcacct cgtcctgctg ctcccgccaa 1201 caacccacct ccaccgtctc tcatgtctac cacccagagc cgcccaccct ggatgaattc 1261 tggcccttca gagagtcggc cctaccacgg catgcatgga ggtggtcctg gtgggcccgg 1321 aggtggcccc cacagcttcc cacacccatt acccagcctg acaggtgggc atggtggaca 1381 tcccatgcag cacaacccca atggaccccc acccccttgg atgcagccac caccaccacc 1441 gatgaaccag ggcccccacc ctcctgggca ccatggccct cctccaatgg atcagtacct 1501 gggaagtacg cctgtgggct ctggggtcta tcgcctgcat caaggaaaag gtatgatgcc 1561 gccaccacct atgggcatga tgccgccgcc gccgccgcct cccagtgggc agcccccacc 1621 ccctccctct ggtcctcttc ccccatggca acaacagcag cagcagcctc cgccaccccc 1681 tccgcccagc agcagtatgg cttccagtac ccccttgcca tggcagcaaa gatccctccc 1741 cgcggcggcg atggcccgag ccatgagagt gaggactttc cgcgcccatt ggtgaccctt 1801 ccaggcagac agcctcagca acgcccctgg tggacaggat ggttcggcaa agcagcctga 1861 gttatttttg tggacggaat cggaacacgc tggctccata tcgtgaaatt tttattaatt 1921 tttttctttt tcctttgtta cttctttatc ttttcctttc ttcagactcc gtccaaggag 1981 atgctctccc cggtcttctg ctgcaattta gattcctttc ccttctctcc agttctcctt 2041 cccttaccaa ggagagggga gcaaatggtt ttgggcaagg gctttggcca ttcatgtcaa 2101 gctggttgtg ggtttttcaa ggtgccatag ccacccccaa atatgtttgt ttaaagcgtg 2161 gggtttttta atctctgcca cccttgtcaa gggagtcttg taaagttgcc gagggtaggt 2221 tcatctccag gtttcgggat tcccatccgt cctggcgatc ctgccagcag tgggtgggca 2281 gcctgagctc cctcgggctc gcctgccagc ctggagttct tcctgtgctc cttgatcacc 2341 tgagctgcct cagattccat ttggtcctct ccttcctgga aggcttcctt ttatgttttg 2401 ttttaatccc aaatgtctga atgttttgca gtgtgtaggg gtttgagccc cttgttcatt 2461 ctccttcctt tttcctcccg cttccctctc catgaagtga ttctgttgac aataatgtat 2521 actgcgcgtt ctcttcactg gtttatctgc agaaatttct ctgggctttt tttcggtgtt 2581 agattcaaca ctgcgctaaa gcggggatgt tccattgaat aaaagagcag tgtggttttc 2641 aaaaaaaaaa aaaaaaaaaa aaaaa //