LOCUS BC008724 2665 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens splicing factor 1, mRNA (cDNA clone MGC:8657
IMAGE:2961666), complete cds.
ACCESSION BC008724
VERSION BC008724.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2665)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2665)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008724.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544129.
FEATURES Location/Qualifiers
source 1..2665
/db_xref="H-InvDB:HIT000033924"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8657 IMAGE:2961666"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2665
/gene="SF1"
/gene_synonym="D11S636"
/gene_synonym="ZFM1"
/db_xref="GeneID:7536"
/db_xref="HGNC:HGNC:12950"
/db_xref="MIM:601516"
CDS 149..1795
/gene="SF1"
/gene_synonym="D11S636"
/gene_synonym="ZFM1"
/codon_start=1
/product="splicing factor 1"
/protein_id="AAH08724.1"
/db_xref="GeneID:7536"
/db_xref="HGNC:HGNC:12950"
/db_xref="MIM:601516"
/translation="MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGL
TREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTR
KKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPR
GNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKA
VEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNT
TVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSG
PATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGG
GPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQY
LGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPP
PPPPPSSSMASSTPLPWQQRSLPAAAMARAMRVRTFRAHW"
BASE COUNT 612 a 788 c 679 g 586 t
ORIGIN
1 gcgtctcgcg ccgccgccgc ccgccgcgtg agaggacggg ctccgcgcgc tccggcagcg
61 cattcgggtc ccctcccccc gggaggcttg cgaaggagaa gccgccgcag aggaaaagca
121 ggtgccggtg cctgtccccg ggggcgccat ggcgaccgga gcgaacgcca cgccgttgga
181 cttcccaagt aagaagcgga agaggagccg ctggaaccaa gacacaatgg aacagaagac
241 agtgattcca ggaatgccta cagttattcc ccctggactt actcgagaac aagaaagagc
301 ttatatagtg caactgcaga tagaagacct gactcgtaaa ctgcgcacag gagacctggg
361 catcccccct aaccctgagg acaggtcccc ttcccctgag cccatctaca atagcgaggg
421 gaagcggctt aacacccgag agttccgcac ccgcaaaaag ctggaagagg agcggcacaa
481 cctcatcaca gagatggttg cactcaatcc ggatttcaag ccacctgcag attacaaacc
541 tccagcaaca cgtgtgagtg ataaagtcat gattccacaa gatgagtacc cagaaatcaa
601 ctttgtgggg ctgctcatcg ggcccagagg gaacaccctg aagaacatag agaaggagtg
661 caatgccaag attatgatcc gggggaaagg gtctgtgaaa gaagggaagg ttgggcgcaa
721 agatggccag atgttgccag gagaagatga gccacttcat gccctggtta ctgccaatac
781 aatggagaac gtcaaaaagg cagtggaaca gataagaaac atcctgaagc agggtatcga
841 gactccagag gaccagaatg atctacggaa gatgcagctt cgggagttgg ctcgcttaaa
901 tgggaccctt cgggaagacg ataacaggat cttaagaccc tggcagagct cagagacccg
961 cagcattacc aacaccacag tgtgtaccaa gtgtggaggg gctggccaca ttgcttcaga
1021 ctgtaaattc caaaggcctg gtgatcctca gtcagctcag gataaagcac ggatggataa
1081 agaatatttg tccctcatgg ctgaactggg tgaagcacct gtcccagcat ctgtgggctc
1141 cacctctggg cctgccacca cacccctggc cagcgcacct cgtcctgctg ctcccgccaa
1201 caacccacct ccaccgtctc tcatgtctac cacccagagc cgcccaccct ggatgaattc
1261 tggcccttca gagagtcggc cctaccacgg catgcatgga ggtggtcctg gtgggcccgg
1321 aggtggcccc cacagcttcc cacacccatt acccagcctg acaggtgggc atggtggaca
1381 tcccatgcag cacaacccca atggaccccc acccccttgg atgcagccac caccaccacc
1441 gatgaaccag ggcccccacc ctcctgggca ccatggccct cctccaatgg atcagtacct
1501 gggaagtacg cctgtgggct ctggggtcta tcgcctgcat caaggaaaag gtatgatgcc
1561 gccaccacct atgggcatga tgccgccgcc gccgccgcct cccagtgggc agcccccacc
1621 ccctccctct ggtcctcttc ccccatggca acaacagcag cagcagcctc cgccaccccc
1681 tccgcccagc agcagtatgg cttccagtac ccccttgcca tggcagcaaa gatccctccc
1741 cgcggcggcg atggcccgag ccatgagagt gaggactttc cgcgcccatt ggtgaccctt
1801 ccaggcagac agcctcagca acgcccctgg tggacaggat ggttcggcaa agcagcctga
1861 gttatttttg tggacggaat cggaacacgc tggctccata tcgtgaaatt tttattaatt
1921 tttttctttt tcctttgtta cttctttatc ttttcctttc ttcagactcc gtccaaggag
1981 atgctctccc cggtcttctg ctgcaattta gattcctttc ccttctctcc agttctcctt
2041 cccttaccaa ggagagggga gcaaatggtt ttgggcaagg gctttggcca ttcatgtcaa
2101 gctggttgtg ggtttttcaa ggtgccatag ccacccccaa atatgtttgt ttaaagcgtg
2161 gggtttttta atctctgcca cccttgtcaa gggagtcttg taaagttgcc gagggtaggt
2221 tcatctccag gtttcgggat tcccatccgt cctggcgatc ctgccagcag tgggtgggca
2281 gcctgagctc cctcgggctc gcctgccagc ctggagttct tcctgtgctc cttgatcacc
2341 tgagctgcct cagattccat ttggtcctct ccttcctgga aggcttcctt ttatgttttg
2401 ttttaatccc aaatgtctga atgttttgca gtgtgtaggg gtttgagccc cttgttcatt
2461 ctccttcctt tttcctcccg cttccctctc catgaagtga ttctgttgac aataatgtat
2521 actgcgcgtt ctcttcactg gtttatctgc agaaatttct ctgggctttt tttcggtgtt
2581 agattcaaca ctgcgctaaa gcggggatgt tccattgaat aaaagagcag tgtggttttc
2641 aaaaaaaaaa aaaaaaaaaa aaaaa
//